Paraburkholderia sp. SOS3: BTO02_19175
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Entry
BTO02_19175 CDS
T04966
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTO02_19175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
para03019
]
BTO02_19175
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_19175
Enzymes [BR:
para01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTO02_19175
Messenger RNA biogenesis [BR:
para03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTO02_19175
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTO02_19175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH_5
Motif
Other DBs
NCBI-ProteinID:
APR37171
UniProt:
A0A1L6I0A6
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All DBs
Position
1:complement(4288931..4290778)
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AA seq
615 aa
AA seq
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MSRSLEILNDVFGYPAFRGQQAEIVEHVADGGDCLVLMPTGGGKSLCYQIPSLVRREKGL
GAGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSGAEAAAIERALRQGDIDLLYVAPER
LMTPRFLELLERAHIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTRPDGTTDAG
VVYCLSRRKVEETAEWLQGQGVRALPYHAGMEFEIRQRHQEIFQREEGVVICATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMVYGLGDVVQQRKMIDESDADD
AHKRVQTGKLDALLGLCETATCRRVRLLAYFGESSEPCGNCDTCLEPPASWDATRESQMA
LSCAFRAQRASGFNFGAGHLIDVLRGNRNEKILQRGHDRLSTFGIGSELSEHEWRAVFRQ
LVAFGFLTVDHDGFGALVLTEASKAVLKGEQKVTMRRYVKPTRSRQASGRTSERADPTVG
MSARERARWDRLRAWRSETAKSDGVPAYVIFHDATLAEIARSEPESLEDLRQIPGMGARK
LDRFGPDLLEVVAAD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctcgaaattcttaatgatgtcttcggctaccccgcgttcagggggcaa
caggccgaaatagtcgagcatgtggcggatggcggagactgcctcgtgctgatgccaacc
ggcgggggcaagtcgctgtgctatcagattccatcgctcgtgcgccgagaaaagggtctc
ggtgcgggcatcgtcgtatcgccgctgattgcgctgatgcaggatcaggtcgccgcgcta
accgaggtcggcgtgcgggctgcctatctgaattcgaccttgtctggtgcggaggcagcc
gcgatcgagcgcgcgctgcggcaaggggacatcgacctgctctatgtcgcgcccgaacga
ttgatgacgccgcgctttctcgagttgctcgagcgcgcgcacatcggactgttcgcaatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgcccggagtacatccagttg
tcggtgctgcacgagcgattcccgtcggtgccgcgcatcgcgctgactgcgactgcggat
gcaatcacgcgtgacgagatcattcatcggcttgccctcgacgacgcacgcgtcttcgtt
tcgagtttcgacaggccaaatatccgatatcggatcgtcgaaaaggacaatgctcgcgcg
cagctgctcgactttattcgtgccgagcacacgaggcccgatggcacgactgacgccggc
gttgtctattgcctgtcgcggcgcaaggtcgaggaaaccgcggaatggctccaagggcag
ggcgtgcgcgcgctgccatatcacgccggaatggagttcgagatccggcagcggcatcag
gaaattttccagcgcgaggagggtgtcgtgatctgcgcgacgatcgcgttcggtatgggc
atcgacaagcccgacgttcgatttgtcgcgcacctcgatttgccgaaaagcgttgaaggc
tactatcaggaaacgggccgcgcaggccgcgatgggatgccggcgaatgcgtggatggtc
tacggcctcggcgacgtcgtccagcagcgcaagatgatcgacgagtcggacgccgacgat
gcgcataagcgagttcagaccggaaagctcgacgcgctgcttggcctgtgcgaaacagca
acgtgccgacgggtgcgactgctcgcctatttcggcgagtcgagcgagccgtgcggaaat
tgcgacacctgtctcgagccgccggcatcgtgggacgcgacgcgcgagtcgcaaatggcg
ctgtcgtgcgcgtttcgcgcgcagcgcgcaagcggtttcaatttcggtgcggggcatctg
atcgatgtcctgcgcggcaaccgcaatgaaaagatcctgcagcgcggccacgacaggctg
agtaccttcggaattggttcggagctgtccgagcacgaatggcgcgccgtgttccggcag
cttgtcgcattcggattcttgacggtcgatcacgacggcttcggagcgctcgtgctaacc
gaagcaagcaaggccgtgctcaagggcgagcagaaagtgacaatgcggcgctacgtgaag
ccaacgcgctcgcggcaggcatcggggcgcacgagcgaacgcgcggacccaaccgtcggc
atgagcgcacgtgagcgcgctcgttgggaccggctgcgcgcgtggcgttccgagacggca
aaaagcgacggcgtgcccgcgtacgtcatttttcacgatgcaacgttggccgaaatcgcc
cgcagcgagccggaatcgctcgaggatttacgccagattcccggcatgggggcgcgcaag
ctggatcgatttgggcccgaccttctggaagtcgtggccgccgactga
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