Paraburkholderia sp. SOS3: BTO02_19190
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Entry
BTO02_19190 CDS
T04966
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTO02_19190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
para03021
]
BTO02_19190
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_19190
Enzymes [BR:
para01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTO02_19190
Transcription machinery [BR:
para03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTO02_19190
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTO02_19190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Biotin_lipoyl_2
Apocytochr_F_C
PYNP_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
APR37174
UniProt:
A0A1L6I107
LinkDB
All DBs
Position
1:complement(4293520..4297764)
Genome browser
AA seq
1414 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVEMLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNAKGEGMSFTGVSEVLRAYENK
EVELASRVNVRITEMVHNEDKSEGAPAFVPKISLYATTVGRAILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRRCGLRETVIFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSESVGKAMMEQLSTEPVTDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSQGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYESGTLLDETAVEEIERLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTSTMRYVTNAKGEQIVISRSGEAMITDDHGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPMTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDATGDEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTVSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGVEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQISDNGDTRFIPGEQVERSDMLDENDRMNAEDKRPATYENVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKSKEM
SDRERFDQIAAEEAFEFGTPETPAAEQQAPHTNE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgcccgacaagatccggtcatggtcgttcggtgaggtcaagaag
ccggaaacgatcaactaccgcaccttcaagccggagcgggatggtctgttctgcgcgaag
atctttggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctcaagcat
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctcgcgaaggtgcgtcgcgaa
cggatgggccacatcgaactggcctcgccggttgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacattgagcgcgtgctgtac
ttcgaagcatacgtggtgatcgatccgggcatgacgccgctcaaagcgcggcagatcatg
accgaagaggattactacaacaaggtcgaagagtacggtgacgaattccgtgccgaaatg
ggcgcggaaggcgtgcgtgaactgctgcgtgcgatcaacatcgacgagcaggtcgagatg
ctgcgcaccgaactgaaaaacaccggttcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtgctcgaggcgttccagcgttcgggcatcaagcccgagtggatgattctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctcgacggcggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgttcgcaacgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggccgccgcggcaaggcgatgacgggtgcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggtcgtttccgtcag
aacctgctcggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctcgaagtgatgggcgtggcgacgacgatcaaggcggcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgaacacccg
gtcatgctgaaccgtgcgccgacgctgcaccgtcttggcattcaggcgttcgagccggtg
ctgatcgaaggcaaggcaatccagctgcacccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctcatgctcgcgtcgaacaacgtgctgttcccggcgaacggcgatccctcgatc
gtgccgtcgcaggatatcgtgctcggcttgtactacgcgacgcgcgaagccgtgaatgcg
aagggcgaaggcatgtcgttcaccggcgtgtcggaagtgctgcgtgcgtacgagaacaag
gaagtcgagctcgcctcgcgcgtcaacgtgcggatcaccgaaatggtccacaacgaagac
aaatccgaaggcgcgccggcgttcgtgccgaagatctcgctgtacgcaaccacggtcggc
cgcgcgatcctgtcggagattctgccgccgggactgccgttctcggtgctgaacaagccg
ctcaagaagaaggaaatttcgcgtctgatcaacacggcgttccgccgttgcggtctgcgc
gaaaccgtgatcttcgccgatcaactgatgcagtcgggcttccgccttgcaacgcgcgcc
ggtatttcgatctgcgtcgacgacatgctcgtgccgccgcagaaggaaacgatcgtcggc
gacgctgcgaagaaggtgaaggagtacgaccgccagtacatgtcgggtctcgtcacggcg
caggaacgttacaacaacgtggtcgacatctggtcggcaacgtcggaatcagtcggcaag
gcgatgatggagcagttgtcgacggaaccggtgacggaccgcgacggcaacgaaacgcgt
caggaatcgttcaactcgatctacatgatggcggactcgggcgcgcgtggttccgcggtg
cagattcgtcagctggcgggtatgcgcggcttgatggcgaagccggacggctcgatcatc
gagacgccgatcaccgcgaacttccgcgaaggcttgaacgtgctgcagtacttcatctcg
acgcacggcgcacgtaagggtctggcggatacggcactgaagaccgcgaactcgggttac
ctgacgcggcgtctggtcgacgtgacgcaggatctggtcgtcgtcgaagacgattgcggc
acgtcgcaaggcgtggcgatgaaggcgctcgtcgaaggcggtgaagtcgtcgaagcgctg
cgcgaccggattctcgggcgcgtcgcggtggcggacgtcgtcaatccggaaacgcaggaa
acgctgtacgaatcgggcacgctgctcgacgaaacggcggtcgaagagatcgagcgtctc
ggcatcgacgaagtgcgtgtgcgcacgccgcttacgtgcgaaacgcgttatggcctgtgc
gcatcgtgctacggtcgcgacctcggccgcggctcgctcgtgaacgtcggcgaagcggtc
ggcgtgatcgcggcgcagtcgatcggcgaaccgggcacgcagctcacgatgcgtacgttc
cacatcggtggtgcggcgtcgcgcgcggcggttgcttcgtcggtcgaagcgaagtcgaac
ggtactgtgcgtttcacgtcgacgatgcgttacgtcaccaacgcgaagggcgagcagatc
gtcatctcgcgttcgggtgaagcgatgatcaccgacgatcacggccgcgagcgcgagcgt
cataaggtgccgtacggcgccacgctgctgcagctcgacggtgcgcagatcaaggcgggc
acgcaactggccacgtgggatccgatgacgcgtccgatcatcaccgagtacggcggtacg
gtgaagttcgagaacgtcgaggaaggcgtgacggtcgccaagcagatcgacgacgtgacg
ggtctgtcgacgctcgtcgtgatcgacgtgaagcgtcgcggctcgcaagcgtcgaagagc
gtgcgtccgcaggtgaagctgctcgatgcaaccggcgacgaagtgaagatcccgggtacc
gagcatgcggtgcagatcggcttccaggtcggcgcgctgattaccgtgaaggacggtcag
caggttcaggtcggtgaagtgcttgcacgtatcccgaccgaatcgcagaagacgcgcgac
attaccggtggtctgccgcgtgtggccgagctcttcgaagcacgttcgccgaaggacgcc
ggtatcctcgccgaagtcaccggtacggtgtcgttcggtaaggatacgaagggcaagcag
cgtctcgtgattacggacctcgaaggcaaccagcacgagttcctgatcgcgaaggaaaag
caggttctggtgcacgatggtcaggtcgtcaacaagggcgaaatgatcgtcgacgggccg
gcggatccgcacgacatcctgcgtctgcagggcgtcgaggcgctgtcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtaatcgtgcgtcagatgctgcgccgcgtgcagatctccgacaacggcgatacgcgtttc
atcccgggcgaacaggtcgagcggtcggacatgctcgacgaaaacgaccgtatgaacgcg
gaagacaagcgtccggcaacgtacgagaacgtgctgctcggtatcacgaaggcgtcgctc
tcgaccgactcgtttatctccgcggcgtcgttccaggaaacgactcgcgtgctgaccgag
gcggcgattatgggcaagcgcgacgatctgcgcggcctgaaggaaaacgtgatcgtcggc
cgtctgattccggctggtacgggtctcgcgttccacaaggcacgcaagagcaaggagatg
tcggaccgcgaacgtttcgaccagatcgcagccgaagaggccttcgagttcggtacgccg
gaaacgccggctgccgagcagcaggcgccgcacaccaacgagtaa
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integrated database retrieval system
