Paraburkholderia sp. SOS3: BTO02_19195
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Entry
BTO02_19195 CDS
T04966
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTO02_19195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
para03021
]
BTO02_19195
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_19195
Enzymes [BR:
para01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTO02_19195
Transcription machinery [BR:
para03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTO02_19195
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTO02_19195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
UbiD
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
APR37175
LinkDB
All DBs
Position
1:complement(4297786..4301892)
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRPIVHQVPFLLATQLESFSTFLQAEVPATQRKPEGLQAAFTSV
FPIVSHNGFARLEFVSYMLSPPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFALMPE
GAQMEFVPERLRGEVARFDITDRDGNVIVTKDKRINAKHIRDLDNAKTKFISVPEDYLLG
RVLAKNVIDGDTGEVIANANDEITETVLEKLREAKIKDIQTLYTNDLDQGPYISSTLRID
ETADRMAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
IGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
TDGKVTDQIDYLSAIEEGRYVIAQANAAVADDGSLTDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKAVVGTGIERTVAVDSGT
TVQAFRGGVVDYVDAGRMVIRVNDDEAVAGDVGVDIYNLIKYTRSNQNTNINQRPIVKVG
DIVSRGDVLADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLEGKVANGGPKKLAKGTKIERAYLEDLDHYHWFDIR
LADEEAAAQLEAIKDSIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPIEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLQRQTKVEELRAFLTKIYNESGRAEEIESFNDDEIVELARNLREGVPFAT
PVFDGATEDEMSKMLDLAFPDDIAQQLGMTKSKNQVRLYDGRTGEAFERPVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgtattcgcaagagtttcgcgaagcgccccatc
gttcaccaagtacctttcctgctggctacccagcttgaatcattcagcacctttctgcaa
gcagaagtgccggccacgcaacgtaagcctgagggtctgcaggcagcgtttacgtcggtg
ttcccaattgtttcccataacggcttcgcgcgtctagagtttgtcagctacatgctgtcg
ccgccggcgttcaacatcaaggaatgtcagcaacgcggcctcacgtattgctcggcgctg
cgcgcgaaggtgcggctcgtgctcctcgacaaggaatcgccgagcaagcccgtcgtcaag
gaagtcaaggagcaggaagtgtacatgggcgaaattccgctcatgacgccgaccggctcg
ttcgtcatcaacggcaccgagcgcgtgatcgtatcgcagctgcaccgttcgcctggcgta
ttctttgaacacgataagggcaagacgcacagctcgggcaagctgctgttctcggctcgt
atcattccctaccgcggttcgtggctcgacttcgaattcgatccgaaggacgtgctgtac
ttccgcgtcgaccgtcgccgcaagatgccggtcacgatcctgctgaaggcaatcggcctc
acgccggagcagatcctcgcgaacttcttcgtattcgataattttgcgctgatgccggaa
ggcgcgcagatggagttcgtgccggagcgtctgcgtggtgaagtcgcgcgctttgacatc
acagaccgcgacggcaacgtgatcgtcacgaaggacaagcggatcaacgcgaagcacatc
cgcgacctcgataacgcgaagacgaaatttatttcggttcccgaagattatctgctgggc
cgcgtgctcgcgaagaacgtgatcgacggcgataccggcgaagtcatcgcgaacgcgaac
gacgagatcaccgagaccgtgctcgagaagctgcgcgaagcgaagatcaaggacatccag
acgctctacacgaacgatctggaccagggtccgtacatctcgtcgacgctgcgtatcgat
gaaacggccgaccgtatggccgcgcgtatcgcgatctaccgcatgatgcgtccgggcgag
ccgccgaccgaagaagcggtcgaggcgctgttcaaccgtctgttctacagcgaagacgca
tacgacctgtccaaggttggccgtatgaagttcaatcgccgtgtcggccgcgacgaaatc
atcgggccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ttgcgcaacggcaagggcgaagtggacgacatcgaccacctcggcaaccgtcgtgtgcgt
tgcgtcggcgaactggcggaaaaccagttccgcgcgggtctcgtgcgtgtcgagcgcgcg
gtgaaggagcgtcttggccaggcggaaagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagacgaacccgctgtcggagatcacgcacaagcgccgtgtgtccgcgctgggc
ccgggcggtttgacgcgcgagcgcgcaggcttcgaagtgcgcgacgtgcacccgacgcac
tatgggcgcgtgtgtccgatcgaaacgccggaaggtccgaacatcggtctgatcaactcg
ctcgcgctgtacgcgcacctgaacgagtacggcttcctcgaaacgccgtatcgcaaggtg
acggacggcaaggtgaccgaccagatcgattacctgtcggcgatcgaagaaggccgttac
gtaatcgcgcaggcgaacgcggcagtggccgacgatggttcgctgaccgacgaactcgtg
tcgtcgcgtgaagccggcgaaaccatgatggtcacgccggatcgcatccagtacatggac
gtggcgccgtcgcagatcgtgtcggtcgcggcttcgctgattccgttcctcgagcacgac
gacgcgaaccgcgcattgatgggttcgaacatgcaacgtcaggctgtgccgtgtctgcgt
cctgagaaggccgtggtgggtacgggcatcgagcgtaccgtggcggtcgactcgggtacg
acggtgcaggcgttccgtggcggcgtggtcgattacgtcgacgcaggccgtatggtgatt
cgcgtgaacgacgacgaagcggttgcaggcgacgtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgcccgatcgtgaaggtcggc
gacatcgtgtcgcgtggcgacgtgctggccgacggcgcctcgacggacctcggcgagctc
gcgctcggccagaacatgctggtcgcgttcatgccgtggaacggctacaacttcgaagac
tcgatcctgatctcggagaaggtcgtggccgacgaccgttatacgtcgatccacatcgaa
gaactgaacgttgttgctcgcgacacgaagctcggaccggaagaaatcacgcgcgatatt
tcgaacctcgcggaagtgcagcttggccgtctcgacgagtcgggcattgtgtacatcggc
gcggaagtcgaagcaggcgacgtgctggtcggcaaggtcacgccgaagggcgaaacccaa
ctgacgccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcgtccgacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcacggtcatcgacgtgcaggtgttc
acgcgtgaaggcatccagcgcgacaagcgcgcgcaacagatcatcgacgatgagctgaag
cgctatcgcctcgacctgaacgaccagctgcgtatcgtcgaaggcgatgcgttccagcgt
ctcgcgcgcatgctcgagggcaaggtcgcgaacggcggtccgaagaagctcgcgaagggc
acgaagatcgaacgcgcttacctcgaagatctcgaccactaccactggttcgacatccgc
ctcgcggacgaagaagcagcggcgcagctcgaagcgatcaaggactcgatcgaacagaag
cgtcaccagttcgatctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtatctcgcggtcaagcgccgtctgcag
cctggcgacaagatggcaggccgtcacggtaacaagggtgtcgtgtcgaagatcgtgccg
attgaagacatgccgtacatggccgatgggcgtccggccgacgtcgtgctgaacccgctt
ggcgtgccgtcgcggatgaacgtgggtcaggtgctcgaagtgcatctgggttgggccgcg
aagggtctcggctggcgtatcggcgaaatgctgcagcgtcagacgaaggtcgaagagctg
cgcgcgttcctgacgaagatttacaacgagtcgggtcgtgcagaggaaatcgagagcttc
aacgacgacgaaatcgtcgaactggcgaggaacctgcgcgaaggcgtgccgttcgccacg
ccggtgttcgacggtgcgaccgaagacgaaatgtcgaagatgctcgacctcgcgttcccg
gacgacatcgcgcaacagctcggcatgacgaagtcgaagaaccaggtgcgtctgtacgac
ggtcgcacgggtgaggcattcgaacgtccggtgacggtcggctacatgcactacctgaag
ctgcaccacctcgtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcagccgctcggcggtaaggcgcagttcggcggtcagcgcttcggtgagatggaa
gtgtgggcgctcgaagcgtacggcgcatcgtatgtgctgcaggaaatgctgacggtcaag
tcggatgacgtgaccggccggaccaaggtgtatgagaacctggtcaagggcgatcacgtg
atcgatgccggcatgccggaatccttcaacgtgctggtgaaggaaatccgctcgctcggt
atcgacatcgatctggaccgcaactaa
DBGET
integrated database retrieval system
