Paraburkholderia sp. SOS3: BTO02_20260
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Entry
BTO02_20260 CDS
T04966
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
para
Paraburkholderia sp. SOS3
Pathway
para03030
DNA replication
para03410
Base excision repair
para03420
Nucleotide excision repair
para03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
para00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTO02_20260
03410 Base excision repair
BTO02_20260
03420 Nucleotide excision repair
BTO02_20260
03440 Homologous recombination
BTO02_20260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
para03032
]
BTO02_20260
03400 DNA repair and recombination proteins [BR:
para03400
]
BTO02_20260
Enzymes [BR:
para01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTO02_20260
DNA replication proteins [BR:
para03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BTO02_20260
DNA repair and recombination proteins [BR:
para03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BTO02_20260
NER (nucleotide excision repair)
GGR (global genome repair) factors
BTO02_20260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
APR40066
LinkDB
All DBs
Position
2:complement(37118..39820)
Genome browser
AA seq
900 aa
AA seq
DB search
MVDGSSYLYRAYHAMPDLRGPDGAPTGALYGIINMLRRMRKEVTAEYSACVFDAKGKTFR
DDWYPQYKANRPPMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDVIGTLAKQAEKHGM
KVVVSTGDKDLAQLVTDHVTLINTMTNETLDREGVLARFGVPPERIVDYLSLIGDTVDNV
PGVEKCGPKTAVKWLTQFETLDGIVAHAAEIKGAVGDNLRRALDFLPMAKKLVTVDTACD
LSQHIDSIEASLASREEARDELRDVFTRHGFKTWLREVEAAEAVEGPGAGETPAPVIDGV
RHYETVQTWEKFDEWLAKIDAAEITAFDTETTSLDPMVAELVGLSVSVEPGHAAYIPVAH
RGPDAPVQLPRDEVLAKLKPWLESADRKKVGQHLKYDEQVLANYGIAMEGIEHDTLLQSY
VLESHRSHDMDSLALRHLGLKTIKYEDVAGKGAQQIGFDEVALEQAAAYAAEDADITLQL
HQTLYPQVKAEAGLDFVYASIELPTARVLRKMERNGVLIDAQKLQQQSNEIALRLIELEK
EAYVLAEGEFNMGSPKQIGQIFFEKLQLPVIKKTPSGAPSTDEEVLQKLAEDYPLPKLLL
EHRGLSKLKSTYTDKLPRMVNARTGRVHTNYAQAVAVTGRLASNDPNLQNIPVRSGEGRR
IREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLSSFAQGEDIHRATASEVFGVTPIE
VSSDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARYPGVARYMDDTRAS
AKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADLIKLSMIAVQKWLD
ESRIGTRMIMQVHDELILEVPDEELSQVRERLPELMCGVASLKVPLVAEVGAGANWEEAH
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgacggttcgagttatctgtaccgggcctatcatgcgatgcctgatttgcgcggc
cccgatggtgcaccgacgggcgcgctgtacggcatcatcaatatgctgcgccgcatgcgc
aaggaagtcacggcagagtatagcgcgtgcgtgttcgacgcgaagggcaagaccttccgc
gacgactggtacccgcagtacaaggccaaccgcccgccgatgccggacgacctgagccgg
cagatcgagccgattcatgtggcggtgcgcgcgctcggctggccgcttctgatgatcgac
ggcgtcgaggccgacgacgtgatcggcacgcttgcgaaacaggccgagaagcacggcatg
aaggtggtcgtttccaccggcgacaaagatctcgcgcagctcgtgactgaccatgtcacc
ctcatcaatacgatgacgaacgagacgctcgatcgtgaaggcgtgctcgccaggtttggc
gtgccgcccgagcggatcgtcgattatctgtcgttgatcggcgataccgtcgacaacgtg
cccggcgtcgagaagtgcggcccgaagacggccgtcaaatggctcacgcaattcgaaacg
cttgatggcatcgtcgcacatgcggccgagatcaaaggtgcggtaggagacaatctgcgc
cgtgcgctcgatttcctgccgatggcgaagaagctcgtgaccgtcgatacagcatgcgat
ctgagccagcatatcgattcgatcgaagcgtcgcttgcttcgcgcgaggaagcgcgcgac
gaactgcgcgatgttttcacgcggcatggcttcaagacctggctgcgcgaagtcgaagcg
gcggaagcggtcgaagggccgggcgcaggcgagacgcccgcgccggtcatcgatggcgtg
cgacactacgagacggtgcagacgtgggaaaaattcgacgagtggctcgcgaagatcgac
gccgcggaaataaccgcgttcgataccgaaacgacgtcgctcgatccgatggtcgccgaa
ctcgtcggcttgtcggtatcggtcgagccggggcatgcggcatatattccggtcgcgcat
cgcggccccgatgcgccggtgcaactgccgcgcgacgaggtgctcgcgaagctcaagccg
tggctcgaaagcgccgatcggaaaaaggtcggccagcatctgaaatacgatgagcaggtg
ttggcgaactacggcatcgcgatggagggcatcgaacacgacacgctgttgcagtcgtac
gtgctcgaatcgcaccgttcgcacgatatggacagtctcgcgctgcgtcatctgggcctg
aagacgatcaagtacgaggacgtcgcgggcaagggcgcgcagcagatcggtttcgacgaa
gtcgcgctcgaacaggccgccgcctatgcagccgaagatgccgatatcaccttgcagctg
catcaaacgctctatccgcaggtgaaggccgaagccgggctcgatttcgtttacgccagc
atcgaattgccgactgcgcgcgtgctgcgcaagatggagcgcaacggtgtgctgatcgac
gcgcagaagctgcagcagcaaagcaacgagattgcgctgcgcctcatcgagctcgaaaag
gaagcgtacgtgctcgccgaaggcgaattcaatatgggctcgccgaagcagatcggacag
atcttcttcgagaagctgcaactgccggtgatcaagaagacgccgagcggtgcgccgtcc
accgatgaagaagtgctgcaaaagctcgccgaagattacccgctgccgaagctgctgctc
gagcatcgcggcctgtcgaagctgaagtcgacctacacggataagctgccgcgcatggtc
aacgcgcgcaccggccgcgtgcatacgaattacgcacaggcggttgcggtaacgggccgg
cttgcatcgaacgatccgaacctgcagaacattccggtgcgcagcggcgaaggccggcgc
atccgcgaggcgtttatcgcgccgccgggccacaagctcgtgtcggccgactactcgcag
atcgaactgcgcatcatggcgcacatttcgggcgacgagtcgttgctgagctcgttcgca
caaggcgaggacatccaccgcgccactgcgtccgaagtgttcggcgtcacgccaatcgaa
gtgagctccgatcaacgtcgcatcgcgaaggtgatcaacttcggcttgatctacggcatg
agctcgttcgggctcgcatcgaacctcggcatcacgcgcgatgcggcgaagctttatatc
gaccgctatttcgcgcgctatcccggcgtcgcacgctatatggacgatacgcgcgcgagc
gcgaaggcgaagggctatgtggagacggtgttcgggcgccgtctgtggctgcccgagatc
aacggcggcaacgggccgcgccggcaggccgccgaacgcgcggcgatcaacgcgccgatg
cagggcaccgcggccgatctgatcaagctgtcgatgatcgccgtgcagaagtggctcgac
gaatcgcgcatcggcacgcgcatgatcatgcaggtgcacgacgaactgatactcgaagta
cccgatgaagagctgtcccaggttcgcgagcggctgcccgagctgatgtgcggcgttgca
tcgctgaaggtgccgcttgtcgcggaagtcggcgcgggcgcgaactgggaagaggcgcat
tga
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