Paraburkholderia sp. SOS3: BTO02_21485
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Entry
BTO02_21485 CDS
T04966
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
para
Paraburkholderia sp. SOS3
Brite
KEGG Orthology (KO) [BR:
para00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
para03000
]
BTO02_21485
Transcription factors [BR:
para03000
]
Prokaryotic type
Helix-turn-helix
Other families
BTO02_21485
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
PAS_4
PAS
PAS_8
AAA
Diguanyl_cycl_sensor
PAS_9
AAA_2
AAA_30
PDE8A_N
AAA_19
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
APR38103
UniProt:
A0A1L6I315
LinkDB
All DBs
Position
2:complement(317672..319558)
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AA seq
628 aa
AA seq
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MSGARFAGDFASDGRPLILIVEDAPANLSILLELLSSHGFAVSVAEDGESALEQLDHMRP
DLILLDVLMPKLDGFATCERLKTNPATREIPVIFMSGLTETVDKVKGFVLGAVDYITKPI
QHDEVLARVSTHLELQRLRHCLLESEARLSGIVESMMDAVVALDRAGSITFFNRAAERVF
RCDARAAIGAPCSRFLAQPLCRLLGDYLRAEPGAAPMWVPEGHNAVRADGTPFPIEASLS
YAEGHGQAIYTLILRDIAERRKAQAEVGQLRGLNRYLEDELREASEYEPVAGATGLDKVM
QQVRQVAATDATVLVSGETGTGKELIAQVVHKLSPRHGKPLVKLNCAALPANLIESELFG
HEKGAFTGALARKAGRFELADGSTLFLDEVGELALDLQAKLLRVLQEGEFERLGGVRTQK
VDVRIVAATNRSLADEAAAGRFRADLYYRLNVFPVMLPPLRERPEDVAPLAAHFVRRYAA
KYGKHVDALTAGQLATLERYRWPGNVRELQHVIERAVILSRGSQLALGDWFGDAAAPASA
STPVSFAAATAAAVATAAAAPPAPAPSAGAAAACMEPTLEQNERAHILRVLEQTGWRVSG
KAGAAERLGVKPTTLESRMKRLAIVRKS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcacgcttcgccggcgattttgcgagcgacggccgcccgctgatactgatc
gtggaggacgcgccggcgaacctgtcgatcctgctcgaactgctgagttcgcacggcttt
gcggtgtcggttgccgaagacggcgaaagcgcgctcgagcagctcgaccatatgcgcccc
gatctgatcctgctcgatgtgctgatgccgaagctcgatggcttcgccacctgcgagcgc
ctgaagacaaacccggcgacgcgcgaaattccggtgatcttcatgagcgggctgaccgaa
acggtcgacaaggtgaagggcttcgtgcttggcgctgtcgactacatcacgaagccgatc
cagcacgacgaggtgctcgcgcgcgtcagcacgcacctcgaattgcagcgcttgcgccat
tgcctgctcgaaagcgaagcgcggctatcgggcatcgtcgaatcgatgatggacgcggtc
gtcgcgctcgatcgcgcgggcagcatcacgtttttcaatcgcgcggccgaacgcgtgttc
cgctgcgacgcgcgcgcggcgatcggcgcgccgtgcagccgctttctcgcgcagccgctg
tgccggctgctcggcgactatctgcgcgccgagccgggcgccgcgccgatgtgggtgccg
gaagggcataacgcggtgcgtgcggatggcacgccgtttccgatcgaagcgagcctgtcg
tatgcggaagggcacgggcaggcaatctacacgctgatcttgcgcgacatcgccgagcgg
cgaaaggcacaggccgaagtcgggcagttgcgcgggctcaaccgttatctcgaggacgaa
ctgcgcgaagcgagcgagtacgagcccgtggccggcgcgacgggtctcgacaaggtgatg
cagcaagtgcggcaggtggcggccaccgacgcgacggtgctcgtcagcggcgagaccggc
acgggcaaggaactgatcgcgcaggtcgtgcacaagctgagcccgcggcacggcaagccg
ctcgtcaagctgaactgcgcggcgctgccggcgaacctcatcgagagcgagctgttcggc
cacgagaagggcgcatttaccggcgcgctcgcgcgcaaggcgggacgcttcgaactggcc
gacggcagcacgctttttctcgacgaagtcggcgaacttgcgctcgatctgcaggcgaag
ctgttgcgtgtgttgcaggaaggcgaattcgagcggctcggcggggtgcgcacgcagaag
gtcgatgtgcgcattgttgccgcgacgaaccgcagtcttgccgacgaagccgccgccggg
cgtttccgcgccgatctctattaccggctcaatgtgtttcccgtgatgctgccgccgctg
cgcgagcgtcccgaagatgtggcgccgctggccgcgcatttcgtgcgccgttatgcggcg
aagtacggcaagcatgtcgatgcgctgacagccgggcagctcgcgacgttggaacgttac
cgctggcccggcaacgtgcgcgaactgcagcacgtgatcgaacgcgcggtgattctgtcg
cggggctcgcaactggcgctcggcgactggtttggcgacgcggcggcgcctgcgagcgct
tcgacgccagtctcgttcgcggccgccactgccgccgccgtcgcgaccgccgccgccgcg
ccgcccgctcctgctccgtctgccggggcggctgccgcctgcatggagcccacgctcgag
caaaacgagcgcgcgcatattctgcgcgtgctcgagcagaccggctggcgcgtgagcggc
aaggccggtgcggcggagcggctcggcgtgaagccgacgacgctcgaatcgcggatgaag
cggctcgcgattgtccgtaagagttga
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