Paraburkholderia sp. SOS3: BTO02_24790
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Entry
BTO02_24790 CDS
T04966
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
para
Paraburkholderia sp. SOS3
Pathway
para02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
para00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BTO02_24790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
para02000
]
BTO02_24790
Transporters [BR:
para02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BTO02_24790
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
APR40193
UniProt:
A0A1L6I8Z0
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Position
2:complement(1069273..1070451)
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AA seq
392 aa
AA seq
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MHRSKIELRVLGTSVTLQEHIRKQAEHDLGIRLRFIVADGSDVQRDGVMRPERYDLYDQW
IHSIDCLWPARALQPIELRRIARWDEINALPRTGHIDGGAGVSAGSVPAERLYVQPDGSL
GSAPSGSISMLPLTHNADSFVYLPDELPDTLLAGEESWAWLLAPQLAGRVALQADPAIGA
IDAALAVQASGLMSFANIGNLSIEEIDALISTLIEFKRRGHFAGFWSSFADAAQLAIAQR
VVIQSIWSPATVELERAGLRFRLACPKEGYRAWFGGMSISRLAHGRVLDAAYAYLNWWTD
GWAGATMARQGYYIANPERTRGFLSDGEWAYWYDGAPASAELPGPTRKHLVHVGQQRDGG
SYTSRMSRIAVWNSVMDEHNYLVRRWTEFMRS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcgctcgaagatcgaattgcgcgttctcggcacctcggtcaccttgcaggagcac
atccgcaagcaggccgagcacgatctgggcatccgcttgcgctttatcgtcgcggacggc
tccgacgtgcagcgcgacggcgtgatgcggcccgagcgctacgacctctacgaccagtgg
attcacagcatcgattgcctgtggccggcgcgcgcgctgcagccgatcgagctgcggcgg
atcgcgcgctgggacgagatcaacgcactgccgcgcaccggccatatcgacggcggcgcc
ggcgtgagcgcaggcagcgtgccggcagagcgcctgtatgtgcagccagatggttcgctg
ggtagcgcgccgagcggatcgatcagcatgctgccgctcacgcataacgccgatagcttc
gtctatctgcccgacgaattgcccgacacgctgctggccggcgaagaaagctgggcatgg
ctgctcgcaccgcaactggccggccgtgtcgcattgcaggcggacccggcgatcggcgcg
atcgatgcggcgctcgccgtgcaggccagtggtttgatgagcttcgccaacatcggcaac
ctgagcatcgaggaaatcgacgcgctgatcagcacgttgatcgaattcaaacgacgcggc
catttcgccggcttctggtcgagtttcgccgatgctgcgcaactggccatcgcgcagcgc
gtggtcattcagagcatctggtcgccggcgaccgtcgaactggagcgcgcgggcttgcgt
ttccggctggcctgcccgaaggaaggctatcgcgcatggttcggcggcatgtcgatctcg
cggctcgcgcatggccgcgtactggatgcggcatacgcatatctgaactggtggacggac
ggctgggccggcgcgacgatggcgcggcagggatattacatcgcgaacccggagcgcacc
cgtggtttcctcagcgacggagaatgggcgtactggtacgatggtgcgcccgcttcggcg
gaattgccgggacccacacgcaagcatctggtgcacgttgggcagcaacgcgacggcggc
agctacacgtcgcgcatgagccggattgcggtgtggaattcggtgatggacgagcataac
tacctggtgcgccgctggaccgaattcatgcggtcctga
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