KEGG   Paraburkholderia sp. SOS3: BTO02_25600
Entry
BTO02_25600       CDS       T04966                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
para  Paraburkholderia sp. SOS3
Pathway
para03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:para00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BTO02_25600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:para03400]
    BTO02_25600
DNA repair and recombination proteins [BR:para03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BTO02_25600
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: APR38788
UniProt: A0A1L6I4Y9
LinkDB
Position
2:1248089..1249024
AA seq 311 aa
MPARSIASLSLSFGLVSIPVKLYSATESSADVRFNLLAPDGSRVKQQYISEATGQIVERG
AMNKGYEFEKDRFVVFTADELKALEDSASHVVEIVAFIPEKSVDPLYYDKAYFIAPDKRG
GKPYSLLQQALLESERGALAKWASKGKTHIVLIRPTENGLIFQQLLFADEVRSLADLHIE
HVPVSAAELKLALQIIEQGTEDHYDPAAYENEEKKRILAAIDRKIEGKEIVSNEPVESES
GGQVIDLMEALRASLSKGGGGGARQKPVARKAAEEAQVTEMPAPRARKPAQRAAKAAAPS
AAAPAKVRARK
NT seq 936 nt   +upstreamnt  +downstreamnt
atgcctgcgcgctcgatcgcatcgctttctctgtctttcggtcttgtttcaatacctgtg
aagctttactccgcaaccgagagttcggcggacgtccgcttcaatctgcttgcgccggac
ggctcgcgggtcaagcagcagtacatttcggaggcgactggccagatcgtcgagcgcggg
gcgatgaacaagggctacgagttcgaaaaggaccggttcgtcgtatttactgcagacgaa
ttgaaggcactcgaggatagcgcgagccacgtcgtggaaatcgttgctttcattcctgaa
aaatccgtcgatcccctttactacgacaaggcgtatttcattgcgcccgataaacgcggc
ggcaagccgtatagcctgctgcagcaggcactgctcgaaagtgagcgcggcgcattggcg
aaatgggcctcaaagggtaaaacacacatcgtactgatccgcccgacggaaaacggcctt
attttccagcaactgctgtttgccgacgaagtgcgctcgcttgccgatttgcatatcgag
catgtgcccgtgtccgccgcggaactcaagcttgcattgcagattatcgagcagggcacc
gaggatcactacgacccggccgcctacgagaatgaagagaagaagcggattctcgctgcg
atcgatcggaaaatcgagggcaaggagatcgtgtccaacgaaccggtggagagcgagtcc
ggcggccaggtgatcgatctgatggaagcgttgcgcgcgagcctgtcgaagggcggcggt
ggcggtgcccggcaaaagcccgttgcgcgtaaggcggcggaggaggctcaggtgaccgaa
atgccggcgccgcgcgcgaggaaacccgcgcagcgggcggcgaaagcggcggctccgtcc
gcagcggctccggccaaggtccgtgctcgcaagtga

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