Paraburkholderia sp. SOS3: BTO02_26285
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Entry
BTO02_26285 CDS
T04966
Name
(GenBank) type IV secretion protein Rhs
Organism
para
Paraburkholderia sp. SOS3
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
DUF6861
Motif
Other DBs
NCBI-ProteinID:
APR38898
UniProt:
A0A1L6I5A4
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All DBs
Position
2:1418742..1423223
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AA seq
1493 aa
AA seq
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MGLLAAARIHDTFTHTSLFAQILKVAASVGAGLLVGLAVGAAAALIVGTGGLGAIVLGAV
VGAVIGVMADAATSAFTGKGSLEQYLSDMANEVIDSFIPGKVEGAIATGSQDVLINGQRA
ARAAGVMAPPLSPGVEPQSVADIFTATDLDFVGCSNHPSPHGEHMAEGSSSVFINGHPAS
RIKDKTTCDGSVNTGSPNVSIGGETVAVREIRSEMPPWLATVAKYAGLAIALCQAVRGKG
PLASKVACFAMNFAVNAVAGEVVNAAARRMTSGRVGHPVHLPTGAKLIDGDEDLDFTLDA
PIPVIWQRFYSSLDPRSDGPLGKGWSLPYSVELNLWVSDGTHPHEWIDAQGRRTRLPHLR
RGEKTYSRIEGMTFACTSGGHWMVEHDDGLCMDFGQATAEETKQFLRPWVIEDRNSNRLY
LRHDDERRLVGLATMSGHTIVLAYDAIHRRRVSEVTLHMEGEAPICLARYAYSEAGQLAA
VRNAAEQITREYGYDADGRMIMHRLPGGLAAFYRWEQFERTGLAPESGPEVGEARIVEHW
SDAGDRYLIAYDFEAQTTFVRDHLGRETRCVWNEAYLVTAHTDALGHTWRFGWSGSRELL
SMTDPMGAATRIEYDDERGLPTRVINAIGEVTEIAWHPRWAEPVCLTSADGSRWQYEYDR
LGNRVAQIDPLKQRTEWCLNRAGQPVARIDARGGMSHFGWDRLHRLMASTDCSGNTTRLT
HDGRGRMVEIRDALGHGSYYGYDALDRIVRVRHPDGSEECYAWQLAGLVSHRDGGGRETR
FAYDKLGRVVSRRDGNGHEVNLQYDAAGNLSRLINASGKQYRFGWDAADRLMEQAGVDDV
LTTYQRDALGYPSAVCQGAGTAEQVTVRFERDRLGRLTLKTTPLTETSYRYDAGGYLIEI
ARRDAQDKPIDRIELKHDALGRLLSECTEWSGEPARCSKLEHGYDELGNRTSLQLADGHR
LEWMYYGSGHLHRATHDGEVVSDFERDALHREVARTQGALTLRTAWDSRGRRVGRWTGGR
RQAGEWGRFARGEDSLAKAFAYDASGELIKRLDPIAGELRFAYDRSGQLLRCEGVPQVGV
LNEQFVYDAAANLLAAGQVGRIEGNRLVMSGDSRFRYDGHGRLVEKLKGSHTRQKLFWNA
EHQLEAVVTVRHGVEQRVRYCYDALGRRVSKEDAFGETRFLWDGLRLLQEARGYREATYL
YEGGSYEPLARIDSVREDGQWLWRAYEQGEGRQTEATARAPAQIYHFHTNSSGAPEELTD
RHGRVVWRTRYRAWGNVVLQEYGREFEPGRRGEVEKPLPQSLRLQGQYEDAETGLHYNLF
RYYDPDVGRFVSQDPIGLLGGFNLYQYAPNPVQWIDPLGLSSVCCCKGSYGGAKQASQYL
KDAGVPRARRKEIMESFDVGTIDMRNAGASEYGLRYYDESKAYAKGRYLFETFPASRESL
AVKPEWNDMTKIQQWNVREGEPMIEGRASAQGPCLPGGQVQKFILNLDALSKP
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcttgctgctgctcgtatccacgacacgttcacacacacttctctgttcgct
cagatactgaaagtggccgcgagcgtcggcgcagggttgctcgtcggcctcgctgtcggg
gcggcggcggcgctcattgtcgggactggagggttgggtgcgattgttctgggagccgtt
gtcggtgcggtgatcggcgtcatggcggacgccgcgacttcggcctttaccgggaagggt
tctctcgagcaatatttgtcagatatggcaaacgaggtgatcgacagtttcataccgggt
aaagtcgagggagcgatcgcaacagggtctcaggatgttcttatcaacggtcagagggcg
gcgcgcgcagccggtgtcatggctccaccgctttctccaggcgttgagccgcaatctgtc
gccgacatattcacggccaccgaccttgatttcgtgggttgctcgaaccatccctcaccg
cacggtgaacatatggcagagggctcgtcgagcgtttttatcaacggccaccccgcctcg
cgcatcaaggacaagacaacatgtgatggttctgtgaacactgggtcgccgaacgtcagc
atcggcggtgaaaccgtggcggttcgcgagatcaggtccgagatgccgccgtggctggcc
acggtggcaaagtatgcaggcctcgcgatcgcattgtgtcaggccgtacgaggtaagggg
ccgctggccagtaaggtcgcctgtttcgcgatgaacttcgcagttaacgcggttgccgga
gaggtagtgaacgcggcagcgaggcgaatgacttccggtcgtgtcgggcatccggtgcat
ttgccaacgggagcgaagttaatcgacggagacgaagacctcgatttcacgctggatgca
cccattccggtgatatggcaacgtttctacagcagcctggacccacgcagcgatgggccg
ctcgggaaaggctggagtttgccctacagcgtggaattgaacctgtgggtaagcgacggc
acgcatccacacgaatggatcgacgcgcaaggcaggcgtacgcgtttgccgcatttgcgt
cgaggcgaaaagacatatagccgaatcgaggggatgacctttgcctgcacgtcgggtggc
cactggatggttgagcacgacgatggtctttgcatggattttggtcaggccacggctgag
gagacgaagcagtttcttcggccttgggttattgaagaccgcaattcgaatcgactttat
ttgcgtcacgatgatgagcgccggcttgttggcctcgcgacgatgtcgggacacacgatc
gttctcgcatacgatgcgatacaccggcggcgcgtttcagaggtgacgctgcatatggaa
ggcgaggcgcccatatgcctcgcgcgctacgcttattcggaagcgggccagcttgccgca
gttcgcaatgcagcggagcagattacgcgcgaatacggctacgacgccgacggacgaatg
atcatgcatcgcttgcccggaggacttgcggcgttctatcggtgggagcagttcgagaga
accgggttggcaccggaaagcgggccagaggtcggcgaggcgcgaattgtcgagcactgg
agcgatgcaggagatcgatacctgatcgcttacgatttcgaggctcaaacaaccttcgtg
cgtgatcatttgggacgggagacccgttgcgtctggaacgaggcatacctggtgacagca
cacaccgatgccttgggtcatacgtggcgattcgggtggagtggttcgcgggaactgttg
tcgatgacggatccgatgggcgcggcgacgcgaatcgagtatgacgatgaacggggtctt
cccactcgcgtgatcaacgccattggggaggtgactgagatcgcatggcatccgcgatgg
gctgagcccgtgtgccttacctcggcggacggcagccgatggcaatacgaatacgatcgg
ttaggcaatcgggtggcgcagatcgatccgctgaagcagcggacggagtggtgcctgaac
cgtgcgggacagccggtagcccggatcgatgcgcgtggcggaatgagccacttcggttgg
gatcgtttacatcgcctgatggcaagcacggattgttcagggaatacgacgcggttgacg
cacgatggcaggggacggatggtggaaatccgcgacgcgttgggccacgggtcgtattac
ggttacgatgcgttggaccgtattgtgcgagtaaggcatccagacggtagcgaagaatgc
tatgcgtggcagcttgccggccttgtctcgcatagggacggtggcgggcgggaaacccga
tttgcttacgacaagctagggcgtgtcgtaagccggcgcgacggcaatggtcatgaggtg
aacctgcagtatgacgcagcgggtaacctgagccggcttatcaacgccagtggcaagcaa
tatcgtttcggctgggatgccgcagaccggctgatggaacaggcaggtgtcgacgacgtc
ttgacgacatatcagcgcgatgcacttggctacccaagcgcggtctgtcagggggcaggg
acagcagagcaggtgactgtgcggtttgagcgtgatcggctagggcgcctgacgctcaag
accacacctctgacggagacgtcctatcgctatgatgccggcggctacctgatagagatc
gctcgccgcgatgcacaggacaagccaatagatcgtatcgagttgaagcatgacgcgctg
ggccgcctgcttagtgagtgtaccgagtggtcaggggaaccggcgcggtgctcgaagttg
gaacatggctacgatgaactcggcaaccgtacctcgctgcagcttgctgacgggcatcgg
cttgagtggatgtattacgggagtgggcacttgcatcgtgcgacccatgatggcgaggtt
gtcagcgactttgagcgcgacgcattgcatcgggaggtggcacgcacgcagggggcacta
acgcttcggacggcgtgggacagtcgcgggcgacgcgtgggtcgctggactggcggccga
aggcaagcgggtgagtgggggcgtttcgccaggggagaggactcgcttgcaaaggcattt
gcgtatgacgcaagcggggaattgatcaagcgacttgatcctatagcgggagagttgcgc
ttcgcctacgaccgaagcgggcaactgttgcgatgcgagggcgtgccgcaggttggcgta
ttgaatgagcagtttgtgtacgatgcggccgccaatttgttggcggccgggcaggtgggg
cgtatcgagggtaaccggctggtcatgtctggggatagccggttccgatatgacggacac
ggcaggctggtcgagaaactaaagggttcgcatacacggcaaaagctcttctggaatgca
gagcatcagctcgaagcggtggtgactgttcgacatggtgtggagcagcgggtgcgctac
tgctacgacgcattgggccggcgcgtatcgaaagaagatgcgtttggggaaacgcgtttt
ctgtgggacgggttgaggttgttgcaggaggcgcgtgggtaccgtgaagcgacgtatctg
tatgaaggcgggagctatgagccattggcgcgcatcgattcggtacgtgaggatggtcag
tggttgtggcgtgcgtatgagcaaggggagggaaggcagacggaggccacggcgcgcgcg
ccagcgcagatctatcatttccacacgaattcgagtggggcgccggaggaactgaccgac
aggcatgggcgggtggtgtggcgaacgcggtatcgcgcctggggcaatgtggtgctgcag
gagtatgggcgggagtttgagccggggcgacgaggcgaggtcgaaaagccgctgccgcag
tcgttgcggttgcaagggcagtacgaagacgctgagacgggactgcactacaatcttttc
agatattacgatccggatgtcgggcggtttgttagtcaggatccgattgggcttctgggc
ggatttaatctgtatcaatacgcgcccaacccggtgcagtggattgatccgctggggttg
tctagtgtctgctgctgcaaaggctcgtacggcggagcaaagcaagcttcgcaatacctc
aaggacgcgggtgttccgagagcgcggagaaaggagatcatggagtcgttcgatgtcgga
acgatcgatatgcgtaacgctggagccagcgagtacggccttcgctactacgatgaaagc
aaagcgtacgcaaaaggccggtatttgttcgagacattcccagcaagccgtgaatcgttg
gcggtcaagccagagtggaacgatatgaccaagattcaacaatggaatgtccgggaaggt
gaacctatgatcgaaggccgggcttcagcacagggtccgtgcctaccaggtggacaggtt
cagaaattcatcctcaacttggacgcgcttagtaaaccatga
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integrated database retrieval system
