Paraburkholderia sp. SOS3: BTO02_32430
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Entry
BTO02_32430 CDS
T04966
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
para
Paraburkholderia sp. SOS3
Brite
KEGG Orthology (KO) [BR:
para00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
para03000
]
BTO02_32430
Transcription factors [BR:
para03000
]
Prokaryotic type
Helix-turn-helix
Other families
BTO02_32430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_2
Mg_chelatase
HTH_23
HTH_30
HTH_28
HTH_20
AAA_5
HVO_A0261_N
HTH_50
HTH_11
HTH_22
HTH_1
HTH_AsnC-type
ElaD-SseL-like_C
AAA
Motif
Other DBs
NCBI-ProteinID:
APR39877
LinkDB
All DBs
Position
2:2792870..2794882
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AA seq
670 aa
AA seq
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MPYVSQTQHIDRVRGAIEGRLPVPAAPDAQRLVSSWQRSYEQYRLDPGSVVGPRVLTSAE
LREVQGKEEAFLRASGQCLTRLHEMIRVADYCVLLTDAHGVTIDYRLERERRSDFKHAGL
YIGSCWSEREEGTCAVANVLTDLAPITVHKIDHFRAAFTTLTCSASPIFAPTGELIGVLD
ASAVQSPDNRDSQRLVFQLVRQSATLIEDGYFLNQTTQHWVLFGHQSRNFVEAQPEVLIA
FDECGNIVASNRKAQECIAGLSGPRHIDEIFDTSAIHLHDVARGDTIVPLRLRASGTLLH
ARIREPLKRVSRGARTIGGSTAAVATSLSSGSRDAVRRVAADVPRDVGALGRFLRSRDAR
IARNAEVALRIAGKRLPILILGETGVGKEVFAHALHDSGARRARPFVAVNCGAIPESLIE
SELFGYAPGAFTGARSRGARGKIAHAHTGTLFLDEIGDMPLSLQTRLLRVLAEGEVMPLG
GDTPVRVDIDVICATHRDLKQMVADGAFREDLYYRLSGATLHMPPLREREDILEVVHEVF
DEEAQGAGHALMLDAQLAERLCGFGWPGNIRQLRNVLRYACAVCDATRVDFRHLSPDIAA
LLAPRHAEAGSPAFAAQPSPAHAGDERARIVDALTRHQWHPNAAAQALGISRATLYRRIA
KLGIVGPHRG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgtctctcaaacgcagcacatcgatcgtgtccgcggcgccatcgaaggacgc
ctgcccgtgccggccgcgcccgatgcgcaacggctcgtatcgtcgtggcagcgttcgtat
gaacagtaccggctcgatccgggctcggttgtcggaccgcgtgtgcttacgtctgcggaa
ttgcgcgaggtgcaaggcaaggaagaggcatttttgcgcgcgtccgggcaatgcctgaca
cgtcttcatgaaatgattcgcgtcgccgactattgcgtgctgctgaccgatgcgcacggc
gtgacgatcgactaccggctcgagcgcgagcgacgcagcgacttcaagcacgcgggactc
tatatcggttcgtgctggtccgaacgcgaagaaggcacatgtgccgttgccaatgtactg
accgaccttgcgccgatcacggtgcacaagatcgatcacttccgcgcagcgttcacgacg
ctgacctgcagcgcatcgccgattttcgcgccgacgggcgagctgatcggcgtgctcgat
gcatcggccgtgcagtcacccgataaccgcgacagccagcgactcgtgtttcagctcgtg
cggcaaagcgcgacgttgatcgaagacggctacttcctcaatcagaccacgcagcattgg
gtgctgttcggccatcaaagccgcaacttcgtcgaggcgcagcccgaggtgctgatcgcg
ttcgacgaatgcggcaatatcgttgcgtcgaaccgcaaggcacaggaatgcatcgcgggc
ctcagcggtccgcgtcatatcgacgagatcttcgatacgtcggcgattcacctgcacgac
gtcgcccgcggcgatacgatcgtgccgctgcgtttgcgtgcgagcggcacgctgctgcac
gcgcggattcgcgagccgctcaagcgtgtatcgcgcggcgcgcgcacgatagggggctcc
actgcggctgtggccacgtccttgtcgagcggctcgcgcgatgccgttcgccgcgttgcc
gccgatgtgccgcgcgatgtcggtgcacttggccgctttctgcgcagccgtgacgcgcgt
attgcacgcaatgcagaggtcgcattgcgcatcgccggcaaacggttgcccatcctcata
ctcggcgaaaccggtgtcggcaaggaagtgttcgcgcatgcgctgcacgactcgggtgcg
cggcgcgcgcgacctttcgtcgccgtcaattgcggcgcgattcccgaatcgctgatcgag
agcgaactgttcggttacgcgccgggcgcgttcaccggcgcgcgcagccgcggcgcacgc
ggcaagatcgcgcacgcgcatacgggcacgctgtttctcgacgaaatcggcgatatgccg
ctcagcctgcaaacgcgtcttctgcgcgtgcttgcggaaggcgaagtgatgccgctcggc
ggcgatacgccggtgcgcgtcgatatcgacgtgatttgcgcaacgcatcgcgatttaaag
caaatggtcgccgatggcgcgttccgcgaagatctctattaccggctaagcggcgcgacg
ctgcacatgccgccgttgcgggagcgcgaggacatcctcgaggttgtgcatgaagtgttc
gatgaagaagcacaaggcgccggccacgcgctcatgctcgatgcgcagctcgccgagcgg
ctctgcggattcggctggcccggcaatatccggcagttgcgcaacgtgttgcgctatgcg
tgcgcggtgtgcgatgcgacacgcgtcgattttcggcatctgtcaccggacattgcggca
ctgcttgcaccccgccatgccgaggccggaagtcctgcttttgcagcgcagccgtcgccc
gcccatgccggcgacgaacgggctcgcattgtcgacgcgctgacgcggcatcagtggcac
ccgaacgcggcggcgcaagcgctcggcatctcgcgcgcaacgctgtaccgccgcattgcg
aagctgggcatagtcgggcctcatcgcggttag
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