Paraburkholderia aromaticivorans: CJU94_08625
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Entry
CJU94_08625 CDS
T05169
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb00550
Peptidoglycan biosynthesis
parb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CJU94_08625 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
parb01002
]
CJU94_08625 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parb01011
]
CJU94_08625 (dacB)
Enzymes [BR:
parb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CJU94_08625 (dacB)
Peptidases and inhibitors [BR:
parb01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CJU94_08625 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
parb01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CJU94_08625 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ASV98226
UniProt:
A0A248VGS4
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All DBs
Position
1:complement(1873168..1874847)
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AA seq
559 aa
AA seq
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MTHAFLSSLARRVQLAARRPGFPSAFTSSSACAPVLRRRFAPRASAWLLACVALGCGATL
PLAAQARVKAAHPSVNVTTVLPPQVMAGLQRAHVPLTSISVVVEKVGDRTPIVALNAGKP
MMPASTMKLVTTYSGLSILGPEYRWRTSAYTEGTVDANGVLHGNLYIQGTGDPKLVPEEL
IDLVQKIHKAGINGIDGALVLDKRYFDPSTRDLPPFDDDATAPYNVGPDPLLYAFKSLSF
TLTPSPDGSVAIDVLPALAQLQMDNHLHAVNGPCRGDAASASPTVTPQPNGTVVASFDGD
YAVRCGPRTINVAVLDHSAFFAGGFLALWQQTGGTFSGATREGAVPVGARLVATHQGPML
SDIVRDINKFSNNTMARNLFLTIGATEEKGPATPAKSARAIEAFLRRDSINMEYLTLDNG
SGLSRDEHITALALADLLQRANASPVAQVFVESLPIAGVDGTMRNRLTNQGAGGNAHIKT
GTLRDVRAIAGYVASADGNSYVVVSLINDPHSEAARAAHDALLEWVYQGPSQGLTKVSDP
VDQPRSSKPRKNPHQRGAH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcttttctgtcttctctcgcacgccgcgtgcaacttgccgcgcggcgtccg
ggtttcccgtctgctttcacctcctcctccgcctgcgcacctgtcctgcgtcgccggttc
gcgccgcgcgcgagcgcatggctgctcgcctgcgtcgcgctcggctgcggtgcgacgttg
ccgcttgccgcgcaggctcgcgtcaaggccgctcatccgagcgtcaacgtcactaccgta
ttgccgccgcaggtgatggccggcttgcagcgcgcacacgtgccgttgacgtcgatcagc
gtggtcgtggagaaagtcggcgaccgtacgccgatcgtcgcgctcaacgcgggcaagccg
atgatgcccgcctcgacgatgaagctcgtcaccacgtactcgggcctgtcgatactcggc
cccgagtaccgctggcgcaccagcgcctacacggaaggcactgtcgacgccaacggcgtg
ctgcacggcaatctctacatccagggcacgggcgatccgaagctcgtgccggaggaactg
atcgacctcgtgcagaagatccacaaggcgggcatcaatggcatcgacggcgcgctggtg
ctcgacaagcgctacttcgatccgtccacgcgcgacctgccgccgttcgacgacgacgcc
accgcgccgtacaacgtcggccccgatccgctgctctatgcgttcaaatcgctgtccttc
acgctgacgccgtcgcccgacggcagcgtcgcgatcgacgtgctacccgcgctcgcgcaa
ttgcagatggacaaccacctgcacgctgtcaacggcccgtgccgcggcgacgcggcctcc
gcgtcgcccaccgtcacgccgcagccgaacggtaccgtcgtcgcctcgttcgacggcgac
tatgcggtgcgctgcggcccgcgcacgatcaacgtcgcggtactcgatcactcggcgttt
ttcgcgggcgggtttctcgcgctgtggcagcagaccggcggcacgttcagcggcgcgaca
cgcgaaggcgcggtgccggtgggcgccagactggtggcgacacaccaggggccgatgctg
tccgacatcgttcgcgacatcaacaaattcagcaacaacacgatggcgcgcaacctgttc
ctgacgatcggcgcgaccgaggaaaagggacccgccacgcccgccaaatcggcgcgcgcg
atcgaagcgtttctgcgccgcgacagcatcaacatggagtatctgacgctcgacaacggc
tcgggcctctcgcgcgacgagcacatcaccgcgctcgcgctcgccgatctgctgcagcgg
gccaacgcgagtccggtcgcgcaggtgttcgtggagtcgctgccgatcgcgggtgtcgac
ggcaccatgcgcaaccggttgaccaaccagggcgcgggcggcaatgcgcacatcaagacc
ggcaccttgcgcgacgtgcgggcaatcgcggggtatgtcgcctcggcggacggcaatagt
tacgtggtcgtcagcctgatcaacgatccgcattcggaagccgcgcgcgccgcgcacgat
gcgctgctcgaatgggtgtatcagggtccgtctcagggcttgaccaaggtttcggatccc
gtcgaccaaccgcgcagcagcaagcccaggaaaaacccgcaccagcgcggcgctcactga
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