Paraburkholderia aromaticivorans: CJU94_09575
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Entry
CJU94_09575 CDS
T05169
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03030
DNA replication
parb03430
Mismatch repair
parb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJU94_09575
03430 Mismatch repair
CJU94_09575
03440 Homologous recombination
CJU94_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parb03032
]
CJU94_09575
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_09575
Enzymes [BR:
parb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJU94_09575
DNA replication proteins [BR:
parb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJU94_09575
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJU94_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
ATP-synt_DE_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASV98400
UniProt:
A0A248VHE6
LinkDB
All DBs
Position
1:2080441..2081592
Genome browser
AA seq
383 aa
AA seq
DB search
MSEQFLPEPALDGPIVFVDLETTGGSTAEHRITEVGVVEVGPAGVSRWSSLVDPQQPIPS
FIQQLTGITNAMVRGAPTFEAIAPALFERLNGKLFVAHNASFDRGFLRGEFRRVGLAFDP
DVLCTVRLSRALFPAEKRHGLDALVERHTLVPADRHRALADADLIWQFWQRLHGLVPLDV
LRAQIERTTRRYRLAGGITEDLLDTAPAGCGVYAFYGEQDLPLYVGRSVRVRQRLRSHLT
GERRSSKDIRLAQQVRRVEWRATGGELGAMLAEAQWIAKLRPGHNRVPRVAKSDPADAPW
PFEGPIVFEEREEASQARAFHVVDRWRYVGHAASLTEAAELHASSAVGTFELSTYRILQS
HLARGLRVMPLSVSGGTLVANVA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagtttttgccggaaccggccctggatggtccgatcgtcttcgtcgacctt
gaaaccactggcggctcgactgccgagcatcgcatcaccgaagtcggtgtggtcgaagtt
ggaccggccggcgtgtcgcgctggagcagtctggtcgatcctcagcaaccgattccttca
ttcattcagcagctcaccggcatcaccaatgcgatggtgcggggagcaccgactttcgaa
gcgatcgcaccggctcttttcgagcgtctgaacggcaaactgttcgtcgcgcataacgcg
agtttcgatcgcggttttctgcgcggcgagtttcgccgggtagggctcgccttcgatccc
gatgtgttgtgcaccgtgcgtttgtcgcgcgcgctgttcccggcggagaagcgccacggt
ctcgacgctctggtcgagcgccatacgctggtgccggcggatcgccaccgcgcactcgcc
gacgccgatctgatctggcaattctggcaacgtctgcacggcctcgtgccgctcgatgta
ctgcgcgcgcagatcgagcgcaccacgcggcgctaccggcttgccggcggcatcaccgaa
gacctgctcgacaccgcgcctgcggggtgcggcgtgtatgcgttctatggagagcaggac
ttgcctctctatgtcgggcgaagcgtgcgcgtgcggcaacgactgcggtcacatttgacc
ggtgagcggcgctcgtccaaggatatccggcttgcgcaacaggtgcggcgtgtcgaatgg
cgggcaaccggcggcgaattgggcgcaatgctcgcggaggcgcaatggatcgcgaagctg
cgacccggccataaccgggtgccgcgcgtcgcgaagagcgatcccgcggacgcgccttgg
ccgttcgaggggccgatcgtcttcgaggaacgcgaggaagcctcgcaggcgcgcgcgttt
catgtcgtcgaccgttggcgctatgtgggccatgcggcttcgctcacggaggctgccgag
ttgcatgcgtcgagcgccgtgggaacgttcgagctgtcgacgtatcgtattctgcaaagc
catcttgcccgcggcctgcgtgtgatgccattgagcgtgtcgggcggaacgctcgtggcg
aatgtcgcctga
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