KEGG   Paraburkholderia aromaticivorans: CJU94_10980
Entry
CJU94_10980       CDS       T05169                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
parb  Paraburkholderia aromaticivorans
Pathway
parb03420  Nucleotide excision repair
parb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:parb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CJU94_10980
   03430 Mismatch repair
    CJU94_10980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parb03400]
    CJU94_10980
Enzymes [BR:parb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CJU94_10980
DNA repair and recombination proteins [BR:parb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CJU94_10980
   MMR (mismatch excision repair)
    Other MMR factors
     CJU94_10980
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 PcrA_UvrD_tudor AAA_30 Viral_helicase1
Other DBs
NCBI-ProteinID: ASV98649
UniProt: A0A248VJQ5
LinkDB
Position
1:2389235..2391586
AA seq 783 aa
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLAGFANLIGKMRAETQQMSLPETVEYVVRTSG
LAEFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPGYTGPASSTPAQLPA
FANEQRAAETGFRVGQQVFHTKFGEGTITALEGGGTDAKAQVKFKRHGEKWLALAVAKLQ
AVE
NT seq 2352 nt   +upstreamnt  +downstreamnt
atgcccgacctgctagccaatctaaaccccgaacaacacgccgccgtcacgctccccaac
gagccggcgctcattctcgccggcgcgggcagcggcaagacccgcgttctgatcacgcgc
atcgcctggctgatccagcatgggctggcctcacccgccacgattctggcggtgaccttc
accaacaaggccgcccgtgaaatgatgtcgcgcctgtccgcgctcctgccgatcgacacg
cgcggcatgtggatcggcaccttccacggtctgtgcaatcgcatgctgcgcgcgcatcat
cgcgacgccggcctgccggccaccttccagattctcgataccgcggaccagctgtccgcg
atcaagcgtctgatgaagggcctcaatatcgacgacgaaaagtacccggcgaaaaatctc
cagtacttcatcaacaacgcgaaggaacaaggcctgcggcctaaagacgtcgacgccacg
gacaacttcaaccgcaaattcgtcgaactctacgaagcctacgaccagcagtgccagcgc
gaaggcgtcgtcgactttccggaattgctgctgcgctgctacgagctgctcgcgcacaat
ccgccgctgcgcgcccactaccaggcgcgcttcaagcacattctggtcgacgagttccag
gacaccaacaagctgcaatacgcgtggctcaagctgctggcgggccagaccaactcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgctttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaacacgagttcaacgttcgccacctgatcaagctcgagcagaactac
cgctcgcacggccatattctcgacgccgccaatcagctgatcgccaacaactcgcggcgt
ctgggcaagaatctgcgtaccgacgcgggccacggcgaaccggtgcgcgtgtatgaatcc
gcgaccgattcgcaggaagccggctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgaaatcgcgattctctatcgcagcaacgcccagtcgcgcacgatc
gaacacacgctggtcaacgcgggcatcgcgtaccgcgtgtacggcggcttgcgctttttc
gagcgccaggaagtcaagcacgcgctcgcctatctgcgcctgatcgacaatccgaacgac
gacaccgcgtttgcgcgcgtcgtcaatttcccgacccgcggcatcggcgcgcgctccatc
gagcaactcgcggacgcggcgcgcctgtacaactgctcgatggccgcggcgattccgtac
gtcgcgggcaaggcgggttcgagcctcgcgggcttcgcgaacctgatcggcaagatgcgc
gcggaaacgcagcagatgagcctgccggaaaccgtggagtacgtggtccgcaccagcggc
ctcgcggagttctaccagaacgagcgcgaaggccaggaccggctggagaacttgcaggaa
ctggtcaacgcggccgccgcgttcgtcagcgaagagggctacggcatggacacgccggcg
cgctccattccgctgcgtccgggcgcgaccgccgcacccgaactggccgtcgccaccgac
gatccgaataccgtcgtgctcgacgcaccgggcatcgccgatcccgcgcaaaacccggac
acgatgacgccgctcgccggcttcctgtcgcacgcgtcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaggccgtccaactgatgacggtgcacgccgccaagggcctcgaa
ttcacggcggtgttcatcaccggtctcgaagaggggctgttcccgcacgagaacagcgcg
atggaatcggacggtctggaggaagagcgccgcctgatgtacgtggcgatcacgcgggcg
aaggagcggctgtatctgtccttcgcgcaaagccgcatgctgcacggccagacccgttac
aacatccgctcgcgtttcttcgacgaactgccgcaggaaacgctcaagtggctcacgccg
aaagtcgaggcgggcgcgcgttggggcggccgttcggacaacgcgggctatgggcgcgac
tggttcgcgcggccgggttatacgggacctgcctcatccacaccggcgcagttgcccgcg
ttcgccaatgaacagcgtgcggcggaaacgggtttccgcgtgggacaacaggtgttccat
accaagttcggcgaaggcacgatcaccgcgctcgaaggcggcggcaccgacgcgaaggcg
caggtcaaattcaagcggcacggcgagaagtggctggcgctcgcggtcgccaaactgcag
gcggtggaatga

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