KEGG   Paraburkholderia aromaticivorans: CJU94_12085
Entry
CJU94_12085       CDS       T05169                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
parb  Paraburkholderia aromaticivorans
Pathway
parb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:parb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CJU94_12085 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:parb03400]
    CJU94_12085 (xth)
Enzymes [BR:parb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     CJU94_12085 (xth)
DNA repair and recombination proteins [BR:parb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     CJU94_12085 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ASV98838
UniProt: A0A248VIM7
LinkDB
Position
1:complement(2638384..2639160)
AA seq 258 aa
MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRTELAEKGYRSWFAGQK
TYNGVGILVRDGLSVDESSIVRNIPGFEDPQQRVIAATIEGTRVISAYFPNGQAPGTDKF
AYKLRWLAALHDWIASEMALHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEFV
RLIELGLVDAFRRFEQPEKLYSWWDYRMMAFRRNAGLRIDHILLSKALAEVCSSCDIDKV
PRKWDQPSDHAPVVAQLG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgaaaatcgccacctggaacgtcaactccctcaaagtccgccagcaacatgtgatcgac
tggctcgaaaccagcggcaccgacgtgctctgcctccaggaactcaagctgcccgacgaa
aaattcccgcgaaccgaactcgcggagaaaggctaccgcagctggttcgctggccagaaa
acgtataacggcgtcggcattctggtgcgcgacggcctgagcgtcgatgaaagcagcatc
gtgcgcaacattcctgggttcgaggatccgcagcaacgtgtgattgcggcgactatcgaa
ggcacgcgcgttatctccgcctatttcccgaacggccaggcgccgggcaccgacaagttc
gcgtacaagctacgctggctcgccgcactgcacgactggatcgcgagcgagatggcgttg
catcccaagctcgcgctgcttggcgactacaacatcgcgccggaagatcgcgacgtgcac
gatccgaaagcatgggaaggccagaacctggtgtcgcccgaagaacgcgcggagttcgtg
cggctgatcgagctcggcctcgtcgatgcgttccgtcggttcgagcagcctgagaaactc
tactcgtggtgggactaccggatgatggcgttccgccgcaacgcggggctgcgtatcgat
cacattctgctgtcgaaggcgttggccgaggtgtgctcgtcgtgcgacatcgacaaggtg
ccgcgcaagtgggatcagccgtcggaccatgcgccggtggtcgcgcagctcggctaa

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