Paraburkholderia aromaticivorans: CJU94_16795
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Entry
CJU94_16795 CDS
T05169
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb02024
Quorum sensing
parb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJU94_16795 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CJU94_16795 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parb03019
]
CJU94_16795 (hfq)
03036 Chromosome and associated proteins [BR:
parb03036
]
CJU94_16795 (hfq)
Messenger RNA biogenesis [BR:
parb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CJU94_16795 (hfq)
Chromosome and associated proteins [BR:
parb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CJU94_16795 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
SelB_WH1
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ASV99653
UniProt:
A0A248VKT1
LinkDB
All DBs
Position
1:3711026..3711514
Genome browser
AA seq
162 aa
AA seq
DB search
MASAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGTRPAPRAGRPSHGEHTTRGPHGSREPRDHREPREPREPRESYGAPSSDRPA
SDRSSSTSDGPVVVTRRRRLFGTGGDGGNHGGGNHGGSGGAE
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcagaatcgcatccgcaaaacgacttcatgaacgccgcgcgcaaagaacga
aagcgcgttgagatctaccttgtcaatggcatccgcctgaccgggtgcatcgagtcgttc
gatcagtatctggtgatgctgcgcacgcctgtcggcctgcaaggcatctacaagcgcgcg
atctccacgatccagctcgacaccggcacgcgtccggctccgcgcgcggggcgcccgtcg
cacggcgagcacaccacgcgcggcccgcacgggtcgcgtgaaccgcgcgatcatcgtgag
ccgcgcgaaccgcgtgaaccacgcgagtcgtatggcgcgccgtcttcggaccggcctgcg
tcagatcgtagcagcagcacgtcggacggcccggtggtcgtgacacgccgccggcgtctg
ttcggcacgggcggcgacggcggcaaccacggtggtggcaatcacggtggcagcggcggc
gccgagtaa
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