Paraburkholderia aromaticivorans: CJU94_17055
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Entry
CJU94_17055 CDS
T05169
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CJU94_17055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_17055
Enzymes [BR:
parb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CJU94_17055
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJU94_17055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
RecD_N
SLFN-g3_helicase
AAA_22
AAA_25
DEAD
MukB
T2SSE
CbiA
Motif
Other DBs
NCBI-ProteinID:
ASV99700
UniProt:
A0A248VL38
LinkDB
All DBs
Position
1:complement(3770905..3773049)
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AA seq
714 aa
AA seq
DB search
MSTLEQSASTPPEFDDIGVSLPAPADFSIALAEGFARRIGTLARRGGASVEAVKWAARGA
FAASRATAEGHVCVPLAVLARRFEASSAEARAALFASGMASDGSQSAAALRPLVVDGQGR
LYLARYYDYERRLARALVAHAGAGGSAAGGAAGGATVRAAVGAEGGADAQTLQERLLRYF
GTPKDNEVDWQRVAAVMALSGRLTIVSGGPGTGKTTTVVGVLACLLDARVDLRIALAAPT
GKAAQRMQEALLARAGDLPPELAARLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDVVVI
DEASMIDVAMAAHLLDAIAPQTRLVMLGDKDQLAAVEAGAVFAELSARPAFTQEGVQRIA
QALGLDETRLVQALPGASRRFDEEAACFLAQPEAPDTSDARPDDLFAYADSPDAFDEPPA
GDLFESAASPPRSASHAQSPLADCVVWLERNYRFGLESPIGRLSLAIRNGSASAALDVLR
IDPVQACAAALHEDTHATLAERTVARLAAGFAPYADALVAALAADVPDPLPLFDALNRFR
ILCATRSGPRGVDQVNTAMAAQVRRAAGVTLAVGAQWFAGRPVMVTRNDYALGLFNGDIG
IALPGASGALRVYFRTGDGGLRAVSPAALPPHDTAFALTVHKSQGSEFEHAVLMLPSVFS
RVLSRELVYTAITRARERVEVVGARAVLAQAIATPTQRDSGLAARIAEAWRDAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttggaacagagcgcatcgacgccgcccgagttcgacgacatcggcgtgagt
ttgcccgcgccggccgatttcagcatcgcgctcgcggaaggtttcgcgcgtcgcatcggc
acgctggcgcggcgcggcggcgcctcggtggaagcggtcaagtgggccgcgcggggtgcg
ttcgccgcgagccgcgcgacggcggaaggccatgtgtgtgtgcccctcgcggtgctggcg
cggcgcttcgaggcgtcgagcgccgaagcgcgtgccgcgctcttcgcaagcggcatggcg
agcgatggttcgcaaagcgcggcagcgttgcggccattggtggtcgacgggcaagggcgg
ctctatctggctcgctattacgactatgagcggcggctcgcgcgcgcgctggtcgcgcat
gccggggcgggcggcagtgccgcgggtggtgccgcgggtggtgccacggtcagggccgca
gttggagccgaaggaggcgccgacgcccaaacgctgcaggagcgcctgctgcgctacttc
gggacaccaaaggacaacgaagtcgattggcaacgtgtcgcggcggtcatggcgctgtcg
gggcggctcaccatcgtcagcggcggacctggcaccggcaagaccaccaccgtggtcggc
gtgcttgcctgcctgctcgatgcgcgcgtggatttgcgcattgccctggcggcccccacc
ggcaaagcggcgcagcgtatgcaggaggcgttgcttgcgcgggcgggcgatttgccgccc
gaacttgccgcgcgtttgccgcagacgtcgtacacgttgcaccgtttgctcggttccggg
ccgggcggacgtttccggcatcatcgcgacaatccgttgccatacgacgtcgtggtgatc
gacgaggcgtcgatgatcgacgtcgccatggcggcgcatctgctcgacgcgattgccccg
caaacgcgcctcgtgatgctcggtgacaaggaccagctcgccgccgtcgaggcgggtgcg
gtgttcgccgagctcagcgcgcgtccggcgttcacgcaggagggcgtgcagcgcattgcg
caggcgctgggcctcgacgaaacacggctcgtgcaggcattgccgggcgcatcgcggcgc
ttcgatgaggaggccgcctgttttctcgcgcagcccgaggcgccggacacatccgacgcg
cggcccgacgatctgtttgcctatgcggattcaccggacgctttcgatgaaccgcccgcc
ggcgacctgttcgaaagcgccgcgtcaccgcccaggtcggcatcgcatgcgcaaagcccg
ctcgccgattgcgtcgtctggctcgagcgcaactaccggttcggtctcgaatcgccgatt
ggccgcttgtcgctcgcgatccggaacggctcggcgagcgcggcgctcgacgtcctgcgc
atcgatcccgtgcaagcttgcgcagcggcgcttcacgaagacacgcatgcgacgcttgcc
gagcgtacggtcgcgcgcctggccgcaggtttcgcgccatacgccgacgcgcttgtcgcg
gcgctcgcggccgacgtgccggatccgttgccgctcttcgatgcgttgaaccgtttccgc
attctgtgcgcaacccgctccgggccgcgcggcgtcgatcaggtgaatacggcgatggcg
gcgcaggtgcggcgcgcggcaggcgtgacgctggcagtgggcgcgcagtggttcgccggg
cgccctgtgatggtgacacgcaacgactacgcactcggtttgttcaatggcgatatcggc
attgcgctgccgggcgcaagcggcgcgctacgcgtatatttccgcaccggcgacggcggt
ttgcgagcggtatcgccggccgcgcttccgccgcacgacaccgcattcgcgctcacggtt
cacaagtcgcaaggctcggagttcgagcatgcggtgttgatgctgccgtcggtatttagc
cgggtgttgtcgcgtgaactggtctacacggcgattacccgcgcgcgcgaacgggtggaa
gtggtcggtgctcgcgccgtgctggcgcaggccattgcgacgccgacgcagcgcgattcg
ggattggccgcgcggatagcggaggcgtggcgcgacgctgaatag
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