Paraburkholderia aromaticivorans: CJU94_23275
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Entry
CJU94_23275 CDS
T05169
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CJU94_23275
09124 Replication and repair
03420 Nucleotide excision repair
CJU94_23275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parb03021
]
CJU94_23275
03036 Chromosome and associated proteins [BR:
parb03036
]
CJU94_23275
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_23275
Enzymes [BR:
parb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CJU94_23275
Transcription machinery [BR:
parb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CJU94_23275
Chromosome and associated proteins [BR:
parb03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CJU94_23275
DNA repair and recombination proteins [BR:
parb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CJU94_23275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
ASW01126
UniProt:
A0A248VQ13
LinkDB
All DBs
Position
2:complement(796956..799220)
Genome browser
AA seq
754 aa
AA seq
DB search
MTYVVAVRAMCEFTARRGDLDLRFTPAPTSLEGMAGHVTVAGRRASGYETEITLTGTHRG
LTVRGRADGYDPAANRLEEVKTHRGDLERMPANHRTLHWAQALVYGHLLCRARGLAGLTV
ALVYFDIGSRKEVLLTQTHTARDLEIFFVEQCERFLDWAVQEEAHRAARNAALGALQFPH
GQFRSGQRELAVSVYRSARDGKPLMAQAPTGIGKTLATIFPLLKACASDQIERVFFLTAK
TPGRALALDAIDTLHRGAGHLPLRTLELVARDKACEHPDKACNGDACPLARGFYDRLDAA
RSAALAGSRLTRAAVREAALAHEICPYYLAQELARWADVVVGDYNYYYDSSAMLYALTQI
NQWRVGVLVDEAHNLLDRARRMYTASLDQASFRLARKTAPVILRKPLERLQREWNAVKRA
QSASYQVYTEVPGKLLSAAQDLIGTVTDQLAEAPLSIDEASLRFFFDAMHFVALAEQFGE
HSIFDITLAADRYAPRDKTSATLCVRNVIPAPFLAPRYAAARTTVMFSGTLSPHHFYRDT
LGLPEATQWLDVEGPFRAEQLRVRVAGNVSTRWRDRERSLVPIVDLIARQYAAQPGNYLG
FLSSFEYLQRVVALMRERHPELPVWAQEPGMDEAARDAFLARFRTMNEGVGFAVLGGAFS
EGVDLVGQQLIGAFIATLGLPQMNEINEQMRRTMEAKFGNGYDYTYLYPGLQKVVQAAGR
VIRTEHDQGVVHLIDDRYRRPEVRRLLPRWWEVP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacctacgtggtcgccgtgcgggcgatgtgcgagttcaccgcgaggcgcggcgatctg
gacctgcgcttcacgccggcgcccacctcgctcgaaggcatggcgggccacgtgacggtc
gccgggcggcgcgcgagcggctacgaaaccgaaatcacgctgaccggcacgcatcgcggc
ctgaccgtgcgcgggcgcgccgacggctacgacccggcggcgaaccggctggaagaggtc
aagacgcatcgcggcgatctcgaacgcatgcccgccaatcaccgcaccttgcattgggcg
caggcactcgtctacggccatttgctatgccgcgcgcgcgggctcgccgggttgacggtg
gcgctggtgtacttcgatatcggcagtcggaaggaggtgctgctgacgcaaacgcatacc
gcgcgcgacctggagattttcttcgtcgagcaatgcgagcgctttctcgattgggcggtg
caggaagaggcgcatcgggccgcgcgcaacgcggcgctcggtgcgttgcagtttccgcat
gggcagtttcgcagcggccagcgtgagctggcggtgtcggtctatcgctcggcgcgcgac
ggcaagcccttgatggcgcaggcgccgaccggcatcggcaagacgcttgcgacgattttt
ccgttgctcaaggcgtgcgcgtctgaccagatcgagcgggtgttctttctgaccgccaag
acgccgggccgcgcgctggcgctggacgcgatcgacacgctccatcgaggcgccgggcac
ctgccgttgcgaaccctcgaactggtcgcgcgcgacaaagcctgcgagcatcccgacaaa
gcctgcaacggcgacgcctgtccgctcgcgcgcggcttctacgaccggctcgacgcggcc
cgcagcgccgcgctggccggctctcgcctcacgcgcgcggcggtgcgcgaggcggcgctc
gcccacgagatctgtccgtattatctggcgcaggaactggcgcgctgggccgacgtggtg
gtcggcgattacaactactactacgacagcagcgccatgctgtacgcgctcacgcagatc
aaccagtggcgcgttggcgtgctggtcgacgaggcgcacaatctgctcgaccgggcccgc
cgcatgtacaccgcgtcgctcgatcaggcaagcttccggctcgcgcgcaaaacggcgccc
gtcatcttgcgcaagccgctcgagcggctgcaacgcgagtggaacgccgtcaaacgcgcg
cagtccgcgagctatcaggtctacaccgaggtccccggcaagctgctctccgctgcgcaa
gacctgatcggcacggtcacggatcaactggcggaagccccgctttccatcgacgaagca
tcgctgcgctttttcttcgacgccatgcatttcgtcgcgctggccgagcagttcggcgag
cattctattttcgacatcacgctcgccgcggatcgttacgcgccccgcgacaaaaccagt
gccacgctctgcgtgcgcaacgtgattcccgcgccgtttctcgcgccgcgctatgcagcc
gcgcgcaccacggtgatgttctccggcacgctcagcccgcatcatttctatcgcgacacg
ttggggctgcccgaagcgacccaatggctcgacgtcgaaggaccgtttcgcgctgagcag
ttgcgggtgcgcgtggccggcaacgtctcgacgcgctggcgcgaccgcgagcgttcgctc
gttccgatcgtcgatctgatcgctaggcaatacgcggcgcagccgggcaactatctgggc
tttctgagcagcttcgagtacttgcagcgggtggtcgcgttgatgcgcgagcggcaccct
gagttgccggtctgggcgcaggaacccggcatggacgaagcggcgcgcgacgcatttctg
gcgcgctttcgcaccatgaacgaaggcgtgggcttcgcggtgctcggcggcgcgttttcg
gagggcgtcgatctggtggggcagcagttgatcggcgcgttcatcgccacgctcggtttg
ccgcagatgaatgagatcaacgagcagatgcgccgcacgatggaggcgaagttcggcaac
ggttacgactacacgtatctgtatcccggtttgcagaaggtggtgcaggcggccgggcgc
gtgatccgcacggagcacgaccagggcgtggtgcatctgatcgacgaccggtatcggcgg
cccgaggtgcggcggttgctgccgcgctggtgggaggtgccgtag
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