Paraburkholderia aromaticivorans: CJU94_23375
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Entry
CJU94_23375 CDS
T05169
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
parb
Paraburkholderia aromaticivorans
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parb03032
]
CJU94_23375
03400 DNA repair and recombination proteins [BR:
parb03400
]
CJU94_23375
Enzymes [BR:
parb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CJU94_23375
DNA replication proteins [BR:
parb03032
]
Prokaryotic type
DNA Topoisomerases
CJU94_23375
DNA repair and recombination proteins [BR:
parb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJU94_23375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
ASW01144
UniProt:
A0A248VQ35
LinkDB
All DBs
Position
2:820165..821427
Genome browser
AA seq
420 aa
AA seq
DB search
MADTTTPIRRRPARTDDDREKPAAAAVMPPGLRHADDTKPGITRKRGNGGFVYFDVSGKR
IDDEDEIKRLNALAIPPAYENVWICPDARGHIQATGRDARGRKQYRYHARWRETRDADKY
ERMAEFGRALPKIRARVARDLKLPGMPCDKVIAAIVQLLDTTLIRIGSVEYARDNQSYGL
TTLRKKHVKIEAGQLRFRFRGKSGIEHDVTVNNPSIKRIVRRCAELPGHDLFQYLDEDGT
RRTVGSADINDYLRRASGADFTAKDYRTWAGSVYALAALRRLICTSAAEARRHVVATVKD
VAALLRNTPAVCKRCYIHPAVISAFEADELQRLAPGQSRRGLKVDEMAFAALLAQAEKRA
AKLAREAGAKGRKARESAVAESIDTSLTSLLKKSRTARKAAAAKTDAKAGAKTARAAAQA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgacacgaccaccccgattcgacgccgccctgcacgcacggacgacgaccgtgag
aaacccgccgctgccgccgtcatgccgcccggcttgcgccatgccgacgatacgaagccg
ggcatcacgcgcaagcgcggcaacggcggattcgtgtatttcgacgtttcgggcaaacgc
atcgacgacgaagacgaaatcaaacgcctcaacgcgctcgccattccgccggcttatgag
aacgtgtggatctgcccggatgcgcgcggtcacattcaggcaaccgggcgcgatgcgcgc
ggccgcaagcaataccgctatcacgcgcgctggcgcgagacgcgcgacgccgacaaatac
gaacgcatggccgagttcggccgcgcattgccgaagattcgcgcgcgtgttgcacgcgac
ctgaaattgccgggcatgccatgcgacaaagtcatcgccgcgatcgtgcaactgctcgac
acgacgctgatccggatcggcagcgtcgaatatgcacgcgacaatcagtcgtacggattg
accacactgcgcaagaaacacgtgaagatcgaagccggccagttgcgcttccggtttcgc
ggcaagagcggcatcgaacacgacgtgacggtgaacaatccgagcatcaagcgcatcgtg
cggcgttgcgccgaattgccgggccacgacctgtttcaatatctcgacgaagacggcacg
cgccgcaccgtcggctccgccgacatcaacgattacctgcgccgtgcgagcggcgcggat
ttcaccgccaaggactaccgcacgtgggccggcagcgtctatgcgctggccgcgctgcga
cggctgatttgcaccagcgcggcggaagcgcgccggcacgtggtggcgaccgtcaaggac
gtggccgcgctattgcgcaatacgccggccgtgtgcaagcgctgctacattcacccagcg
gtgatcagtgcattcgaagcagacgaattgcagcgccttgcgcccggtcaatcgcgtcgc
gggctgaaagtggacgagatggcttttgccgcattgcttgcgcaggccgagaaacgcgcg
gcgaaactcgcacgcgaggcgggcgcgaagggccgcaaggcgcgtgagtcggcggtggcg
gaaagcatcgacacgtcgctcacgagtttgctcaagaaatcgcgaacggcgcgtaaagca
gcggcggcgaagaccgatgcgaaggccggcgcaaagaccgcgcgcgcggcggcgcaagcc
tag
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