Paraburkholderia aromaticivorans: CJU94_33100
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Entry
CJU94_33100 CDS
T05169
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
parb
Paraburkholderia aromaticivorans
Pathway
parb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CJU94_33100 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
parb03000
]
CJU94_33100 (nifA)
Transcription factors [BR:
parb03000
]
Prokaryotic type
Helix-turn-helix
Other families
CJU94_33100 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
GAF_3
AAA_16
AAA_3
Parvo_NS1
AAA_22
bpMoxR
AAA_7
DUF815
TM1506
Motif
Other DBs
NCBI-ProteinID:
ASW03078
UniProt:
A0A248VVP0
LinkDB
All DBs
Position
pBN1:complement(14653..16365)
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AA seq
570 aa
AA seq
DB search
MVNIQATVARQALDCVYEVSKTLVSSLDVAKTFRESLNYLLHTMEWRRAFVVLAESDGQL
RGLCAAGLSRDEQQRLQFRPGEGIVGRAFKSGIGVIVPDVNDEPVFLNRTGGADQMPGAC
IAMLATPIYADRRTLGVLAVDCVNPGASRLFADDLHLMKIVATLMGQALLLQRSVSAAHD
SMQDEVRRMQKAIKPSQQIDQVVGVSAAMQAVFGQVRQVAPARTTVLLRGESGTGKEVIA
RAIHNLSPRSGDSFVRVNCAALTESLLESELFGHEKGAFTGAQGQRKGRFELAHGGTLFL
DEIGDISPSFQAKLLRVLQEREFERVGGTTPVKVDVRLILATNRNLERMVKAGEFRADLY
YRINVVSIELPPLRERREDIPAMAQHFLARFNRENAQSIRFDAEAMRVLTNCYWPGNVRE
LENCVERTATMTRDGVIDRFKFLCQEDRCLTKVLHYIEREDAVRPARLADIPIAEVSSPP
YGHHDLDVPSVPAAWSGGTDTDAETELDPATDERAFATSSAGKPEGERERLIWAMERCGW
VQAKAARLLGITPRQMGYALHKYAIEVRRF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacattcaggcaaccgtcgcccggcaagcactggactgcgtctatgaggtgagc
aagacgctggtttcgtcgctcgatgtggcgaagaccttccgcgaatccctgaactacctt
ctgcacacgatggagtggcgacgcgcctttgtggtgctggccgaatccgacgggcagttg
cgcggcctgtgcgccgcgggtctttcgcgcgacgaacagcagcgtctgcagtttcgtcca
ggggaaggcattgtgggccgcgcgttcaagagcggcattggcgtgatcgtaccggacgtg
aacgacgagccggtgttcctgaatcgcaccggcggcgcggaccagatgcctggggcgtgc
atcgccatgctcgcgacgccgatctatgccgaccggcgcacgctgggtgtgctcgccgtg
gattgcgtgaatcccggcgcgagccggctgttcgccgacgacctgcatctgatgaagatc
gtcgccacgctgatgggccaggcgttgctgcttcagcgcagcgtcagcgccgcgcacgac
agcatgcaggatgaagtcagacgtatgcagaaggcgatcaagccgagccagcagatcgat
caggtggtcggcgtttcggccgccatgcaggcggtgttcggccaggtgcgccaggtcgcg
ccggcgcggaccacggtgctgctgcgcggcgagagcggcaccggcaaggaagtgatcgcg
cgcgcgatccacaatctgtcgccgcgcagcggcgattcgttcgtgcgggtcaattgcgcg
gcgctgacagaatctcttctggagagcgaactgttcggccacgaaaagggggcgtttacc
ggcgcgcagggacagcgcaagggccgcttcgaactggcgcacggcggcacgctgtttctc
gatgaaattggcgacatctcgccgtcgtttcaggccaagctgttgcgcgtgctgcaggag
cgcgagttcgaacgtgtcggcggtaccacgccggtgaaggtcgatgtgcgtctgattctc
gccaccaaccgcaacctcgaacggatggtgaaggccggcgaatttcgcgcggatctctac
taccgcatcaacgtggtcagcatcgaattgccgccgctgcgcgagcggcgcgaagatatt
ccggcgatggcgcagcactttctcgcccgtttcaaccgcgagaacgcgcagtcgatccgc
ttcgacgccgaagcaatgcgggtgctgacgaactgctactggccgggcaacgtgcgtgag
ctggagaactgcgtcgagcgcacggcgaccatgacgcgcgacggcgtgatcgaccggttc
aagttcctgtgccaggaagatcgctgcctgacgaaggtgctgcactacatcgagcgcgaa
gatgccgtgcgtcccgcgcgcctcgccgacattccgatcgccgaagtgtcgtcgccgccg
tacggccatcatgatctggatgtcccgtcggtgccggctgcctggtccggcggcacggac
acggacgccgaaaccgaactggatcccgcgaccgacgagcgcgcattcgcgacatcgtcg
gccggcaagccggaaggcgaacgcgaacgcttgatctgggcgatggaacgttgcggctgg
gtgcaggctaaagctgcgcggctgctgggcatcacgccccggcaaatgggctacgcgctg
cataaatatgccattgaggttcgccggttctga
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