Paraburkholderia aromaticivorans: CJU94_38210
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Entry
CJU94_38210 CDS
T05169
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
parb
Paraburkholderia aromaticivorans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
Sigma54_activ_2
V4R
HTH_8
AAA
AAA_5
AAA_16
AAA_2
HTH_28
AAA_22
HTH_1
Hpr_kinase_C
HTH_30
RsgA_GTPase
nSTAND3
NACHT
AAA_24
ATPase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ASW03983
UniProt:
A0A248VYM9
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Position
pBN2:393462..395306
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AA seq
614 aa
AA seq
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MKEEKGKAGEIDRGIPLFVPDVVADLHFPDIRDLAERLRFNPADGRIWLDDRRMVLIHTD
AFASLRQELIEALGIDAARGLLTRMGYLSGSRDAALARKVRGQDSAFDAFAVGPQLHALE
GIVLVEPVRVDIDSTTGQYYGEFLWKDSSEDEAHISVYGIGSEPACWMQIGYACGYTSAF
MGRRILYREVECRAMGNTLCRIIGKPVEEWDAPDADLRYMLPQSLEKRRFVALKSSGPAP
TDSTDHECVPCKPDEVPVKEGPIGASAGFNAVMHKIFRVAPTSATVLLMGESGVGKSLFA
RELHNRSSRVGKPFVELNCAAIPDSLIESELFGAERGAFTGASDARVGRFESANEGTIFL
DEIGTLSLTAQAKLLRVLQTGEMERLGSSKTVKVNVRVITATNDNLKQAIKSGRFREDLF
YRLNVFPIFIPPLRERKDDIPVLLEFFIKKFSRRHGRPLKGLSNRALHLLLDYSWPGNIR
EMENVLERGVILAEEGGTLDVCHLFSSDDTVECKGAFGLSDLGSLVLDSISTSAPPEAIR
KSGEAPEGLEDWAALAVQMNKATLCEVEDALVRAALKAANGNISEAARLLGLTRAQLDYR
VKKLNNSMPISTEK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaagggaaagcgggagaaatagacagaggaataccgcttttcgtgccg
gatgtagtggctgatctgcatttcccggacattcgggatctggcggaacggcttcgtttc
aatcctgcggacggtcgcatctggctcgacgatcgtcgaatggtcttgatccatacggac
gcgtttgcttcactgcgacaggaactcatcgaagctttaggtatcgatgctgcgcgcgga
ttgctgacccgcatgggatatctatcgggttctcgggatgccgcgctcgcacgaaaggtt
cgcgggcaagacagcgcatttgatgccttcgcggtaggtcctcaacttcacgccctggaa
ggcatcgtcctggtagaacctgtcagagtggatatcgacagcaccaccggtcagtattac
ggggaatttctgtggaaagactcgtccgaggatgaggctcacatatccgtgtacggcatc
ggctccgaaccagcctgctggatgcagattggctacgcgtgcggctacacgagcgctttc
atgggccggcgtattctataccgggaagtcgaatgccgcgcgatgggcaatacattatgc
cgaatcattggaaagcccgtggaggagtgggacgcccccgatgcggaccttcggtatatg
ctgccacaatctctggagaaacgtcgctttgtcgcgttgaaaagttcagggccagccccg
actgactctacagatcatgagtgtgtgccttgcaagcctgacgaagtgcctgtcaaagaa
ggaccaataggcgcgtctgctggattcaacgcagtgatgcacaaaatattcagagtggct
cccactagtgcgaccgttttactgatgggcgagagcggcgtgggcaaaagcctgtttgct
cgggaactgcacaacagaagttcgcgtgtagggaaaccattcgttgaattaaattgtgca
gctattcccgattcgctgattgaatcggagctttttggtgcggagcgaggggcattcacc
ggcgcatccgatgcccgcgttgggcgtttcgaaagcgcaaacgaagggaccatttttttg
gatgagattggtactctcagtctaaccgctcaagcgaagctattgagagttttgcaaacg
ggggagatggagcgactcgggagttcaaagacggttaaggtcaatgttcgggtaattact
gcgactaatgacaacctcaaacaggcgataaaaagcgggcgttttcgtgaggatcttttc
taccggctgaatgtatttccaatttttattccacctttgcgtgaaagaaaggatgatatc
ccggttttgctggaatttttcataaagaaattttcacgaaggcatggtcggcccctcaag
ggcttatccaatcgtgcgcttcatctattgctggattactcgtggcccgggaatatccgc
gagatggagaatgtgctcgaacgtggcgttatcctcgccgaggaaggcggtacgctcgat
gtatgccacttgtttagtagcgatgacaccgtggaatgtaagggtgcttttggtttaagc
gaccttgggtcgcttgtcctcgattccatatcgacgagcgctccccccgaggcgatccgc
aagagcggagaagccccggaggggctcgaggattgggcagcgcttgctgtacagatgaac
aaagcgacactttgcgaggtcgaagatgcgctcgtacgcgcggcactcaaagccgcgaac
gggaacatatcagaagccgcacgtcttctcggattgacacgcgcgcaactcgactaccgt
gtcaagaagttgaacaattcaatgccaatctcgacggagaagtag
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