Parabacteroides sp. CT06: CI960_00470
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Entry
CI960_00470 CDS
T05011
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03030
DNA replication
parc03430
Mismatch repair
parc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI960_00470
03430 Mismatch repair
CI960_00470
03440 Homologous recombination
CI960_00470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_00470
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_00470
Enzymes [BR:
parc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI960_00470
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CI960_00470
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CI960_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
T2SSK
Herpes_UL49_1
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AST51965
UniProt:
A0A223HHQ3
LinkDB
All DBs
Position
complement(152155..155958)
Genome browser
AA seq
1267 aa
AA seq
DB search
MEPFIHLHVHTQYSLLDGQASIDALIDKAYKDGMRAIAVTDHGVMFGIKEFFNKVSKKNS
KPLGIIKDSEKELKPLLAKDAPTDEEQQRITELQKQIAEAKASIFKPIIGCECYCARNGR
HSKLASQDDRSGWHLIVLAKNKNGYKNLIKMVSLSWTEGFYGRPRIDKELLEKYHEDLII
CSACLGGEIPQHIMHGRIDKAEESIKWFKNLFGEDYYLEMQRHETHDPNADCTIFPHQQE
VNKVLIELAHKHNIKLIATNDVHFVNADDAEAHDRLICLSTGKDLDDPKRMRYSKQEWMK
TTAEMNTIFADIPEALSNTLEIADKIEFYSIDSGPIMPTFAIPEEFGTEESYRQKLTEHD
LFEEFTRDENGNVVLSEEEAHSKIKKLGGYDKLYRIKLEADYLAKLTYDGAKELYGDPLN
DEVKERLNFELHIMKTMGFPGYFLIVQDFIRAAREELGVSVGPGRGSAAGSAVAYCLGIT
KIDPIKYDLLFERFLNPDRISLPDIDTDFDDDGRGEVLRWVTEKYGAERVAHIITYGTMA
TKSAIKDVARVQKLPLSESNRLAKLVPDKIPDMKKFKLGDAIKYVPELKEAANGNDPLAR
DTLKYAQMLEGNVRNTGVHACGVIIGRYDISDVVPVSTAKDKDTGEEMLVTQYEGSVIEE
TGLIKMDFLGLKTLSIIKEAIENVKLTTGHDLDIDHISLEDPKTYKLYCDGKTTGTFQFE
SAGMQKYLKELQPSKFEDLIAMNALYRPGPMDYIPSFIARKQGKEEIKYDIPVMERYLKD
TYGITVYQEQVMLLSRLLANFTRGESDALRKAMGKKLIEKMNHLKSKFMAGGQANGYKEE
TLNKIWSDWEKFASYAFNKSHATCYSWVAYQTAYLKANFPSEYMAAVLSRSLSNITDITK
FMDECKAMGIQVLGPDVNESILKFSVDKNKNIRFGLGAVKGVGESAVQNIIEERKKNGPY
KSIFDFVERVNLTACNKKNIESMALAGAFDNFGIQREQFFTDSGKGELFLDTLVRYGNKY
QMDKSTAVNSLFGGDALIAIAKPEIPQCERWSDLERLNKEKELVGIYLSAHPLDEYRIIL
KYVCNTGMVELNERETLQGREVLLGGIVTGFREGMTKNGKPYGILKIEDFTGSGEIPLFG
QDYIEYSKYGKIGMYLLITARVEPSRWDPNKLDFKIGTVNLLQDEKDKLIEKISITVPIH
DLDEPTINELSVLIKNNPGHSLLYFKVVDGEHNISLNLFSQNIRLNVTRELVDFLQENEN
IDFKING
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgtttattcatttacacgtacatacccagtattccttgctggacggacaggca
tccatcgacgcgttgatcgacaaagcgtacaaagacggaatgcgtgcgatcgccgtaaca
gaccatggcgttatgttcggtatcaaggagtttttcaataaggttagcaaaaagaacagt
aaacctctcgggatcatcaaggactccgagaaagaactaaaaccgctgctggccaaggat
gcgccaaccgatgaggaacaacaaaggataacggaactacaaaaacaaatcgccgaagcg
aaagcttccatcttcaagccgatcatcgggtgcgaatgttattgcgctcgcaacggaagg
catagcaagctggcctcgcaagacgaccgtagcggctggcacttgatcgttctggccaaa
aataagaacggatacaagaacctgatcaagatggtatccctctcatggacggaaggattc
tacggacgtccgcgtattgacaaggaattgttggagaaatatcatgaggatctgatcatc
tgctccgcctgtttaggtggagagattccacagcatatcatgcacggacgaattgataag
gccgaggagtctatcaaatggttcaaaaacttattcggagaagactattaccttgagatg
caacggcacgagacacacgaccccaacgccgattgcacgattttcccgcatcaacaagag
gtgaacaaggtactgatcgaacttgctcacaaacataatatcaagctaatcgccaccaac
gacgtccatttcgtcaatgccgacgacgctgaggctcacgaccgcctgatctgccttagt
accggcaaagacttggacgaccccaagcgtatgcgctactccaagcaagaatggatgaag
acaaccgccgagatgaacaccatcttcgccgatatccccgaagctttgagtaatacgctc
gagatagccgacaaaatagaattctactccatcgacagcggtcctatcatgccgactttc
gccattcccgaggagttcggtaccgaggagtcctaccgtcagaaattaacagagcatgat
ttatttgaggaattcacccgagacgagaacggtaatgtcgtattaagcgaggaagaggcg
cactccaaaatcaagaaattaggtggatacgacaaactataccgcatcaagctggaagcc
gactatttggcgaaattgacatacgacggagccaaggagctttacggagaccccttgaac
gatgaagtaaaggagcgtctgaacttcgagttacatatcatgaagaccatgggtttcccc
ggctacttcttgatcgtgcaagatttcatccgtgctgctcgtgaggaactcggtgtatcc
gtaggaccgggacgtggttcggccgccggatctgccgtagcttattgcttagggatcacc
aagatcgacccgatcaaatatgacctcctgttcgagcgtttcttgaatccggaccgtatc
tccctccccgatatcgataccgacttcgatgatgatggccgtggcgaggtcttacgctgg
gtaacggagaaatacggtgccgagcgtgtggctcatatcattacttatggtacgatggct
accaagtccgctatcaaagatgtcgcccgggtacagaaattaccgttatccgaatcgaac
cggttagccaaattggttccggataagatccctgacatgaagaagttcaaattgggcgac
gccatcaagtatgtgccggaactaaaagaggcggctaacggaaatgatccgctggcacgg
gataccttgaaatacgcccagatgctggaaggcaacgtccgtaacacgggtgtacacgcc
tgcggtgtcattatcggacgttatgatatatcggatgtcgtacctgtcagtacggcgaaa
gacaaggataccggcgaggagatgctggttacccaatacgagggttccgtgatcgaggaa
accggattgatcaagatggacttcttgggcttgaagaccttgtccatcatcaaggaagcg
atcgagaacgtgaaactgactaccggacatgatctggatatcgaccatatcagtctggag
gaccccaagacttataaattgtattgcgacggaaagacaaccggtacattccagttcgag
tccgccggtatgcaaaagtatttgaaggagttgcaaccttctaaattcgaggacttgatc
gccatgaacgccctgtatcgcccgggcccaatggattacatcccttcttttatcgcccgt
aaacagggtaaggaggagatcaagtacgatattcccgtcatggaacgctacctaaaagat
acgtacggtattacggtctatcaggagcaggtcatgcttctatcccgtttgctcgctaac
ttcacgcgtggtgagagtgatgccttacgtaaggcgatgggtaagaagttgatcgagaag
atgaaccacttgaagtctaaatttatggctggtggtcaagccaacggctataaagaggaa
actttaaataagatctggtccgactgggagaagttcgcctcatacgcattcaataagagt
cacgctacttgttactcatgggtggcttatcagaccgcttacttgaaagcgaacttcccg
tccgagtatatggccgccgtcttgagccgaagcttatccaatatcacggatatcacgaag
ttcatggatgaatgtaaagcgatgggtattcaagtattgggaccggacgtgaacgagtct
atcttgaagttcagcgtagataagaacaagaacatccgcttcgggctaggcgccgtgaaa
ggcgtaggtgagtcagccgtacaaaatatcatagaggaacgcaagaagaacggcccgtac
aagagtatcttcgatttcgtagaacgggtgaacttgaccgcttgcaataagaaaaacata
gagtccatggctttggccggagcgttcgataacttcggtatccagcgtgagcagttcttc
accgacagtggaaaaggggaattgttcttggataccttggttcgctatggtaacaaatac
cagatggataagagcacggcagtcaactctttattcggtggagacgccttgatcgccatc
gctaaaccggagatcccgcaatgcgagcgttggagcgatctcgaacgcctaaataaagag
aaggagttggtcggtatttacctatccgcccacccgttggatgaataccgtatcatatta
aagtatgtatgtaataccggcatggtagaacttaacgagcgggaaaccttacaaggccgg
gaggttttattaggtggtatcgtcaccggtttccgggaaggaatgaccaagaacggaaag
ccttacggaatcttgaagatcgaggatttcacgggtagtggcgagatccctcttttcgga
caggattatatcgaatacagcaagtatggtaaaatagggatgtatctcttgatcacagcc
cgtgtagagcctagccgctgggaccccaataaactggacttcaagattggtaccgtcaac
cttttgcaagacgagaaagacaagctgatcgagaaaatcagtatcacggtcccgatccat
gatttggacgagccgactatcaatgagctttcggtattgatcaagaacaatccgggccat
agcctgttatattttaaggttgtcgatggggaacataatatttccctaaatctcttctcc
caaaatatccgcttaaacgtgacccgtgagctggtagactttttacaggagaacgagaat
atcgattttaaaattaatggttaa
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integrated database retrieval system
