Parabacteroides sp. CT06: CI960_01030
Help
Entry
CI960_01030 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_01030
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_6
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
AST52065
UniProt:
A0A223HI08
LinkDB
All DBs
Position
complement(281094..282953)
Genome browser
AA seq
619 aa
AA seq
DB search
MKNLFIYAAVIAATMGSMTACSDFLDVKPVTNKQEPDFVSQEGITQLLTGMYARLNSTDA
NDGYFRSTLTNYVYGDVMGGDANKGSTFQDQPDFTSLETYTFTTDNAYFETKWAHSYHGV
FTANNVIKVADLAKEELSAIAGQSKDFYTETIAQARFIRGFFHFEVVKLFGAAVPYVDDI
AMKENVNPQVSNVDENGNYIYIWDKIVEDLQFAYDNLPDTWTEAGRVNKWAAGAMLAKVK
MYQSSPYNGKNGTSNHWTEVKTILEDVIANGKDNKGTKFRLADTYEELYTAGESDWTGES
VFDVQAAVSGTVEQTANINGAWHIGFSGALGTGGWGFYQPSYDMVNAHIVDANGLPKMDD
SYRNDPALSTLDENNLPHTDLTVYTDPRLDVSTGRFETPFLDWTVPNALDGWVRDVSNGG
LYLNKKNIPRKADKGSLSNTTQTNSTAKNFHLIRYADVLLWYAETLIELGQPQQAGEYIN
QVRARAANSYVKAVDPATMTEASSTYVLDDKINGKQSTDAAANYRIGLYPPSQFASKDKA
LEALRWERRIELAMEGHRWYDLARWGIASEVLNDFVKYEAKHLGKYSNSTYNAKWATMPI
PHNEILKMDGLLVQNENWK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctatttatatatgcggcagtcattgccgccacgatgggaagcatgactgct
tgctccgatttcttggatgtgaagccagtcacaaataaacaggaaccggattttgtatcg
caagaaggtattactcagttgctaactggtatgtacgctagattaaactctacagatgcg
aatgatggatacttccgttcgacattgaccaactatgtatatggtgacgtaatgggaggt
gacgcaaacaaaggttcaactttccaagaccaaccagactttaccagcttggaaacttat
acatttacaactgacaacgcttattttgaaacaaaatgggcacatagttaccatggggta
ttcaccgcaaacaacgtaatcaaggtagcggatttagcaaaagaagagctttcggctata
gcaggccaaagtaaagacttctatacggaaacaatcgcccaagcccgcttcatacgcggt
ttcttccatttcgaggtcgtaaaattatttggagcggctgttccttatgtagatgacata
gccatgaaagagaacgtgaacccacaagtctctaatgtggatgagaatgggaattatatc
tatatctgggataagatagtagaagacttgcagtttgcctatgacaatctgcccgacact
tggaccgaggcaggacgcgtaaacaaatgggcagctggcgctatgttggctaaagtaaag
atgtaccaatcctctccatataacggaaaaaatggaacgtctaatcattggactgaagtt
aaaacgattttggaagatgtaatcgcaaacggaaaagataacaaaggcactaagttccgc
ttggcagatacatacgaggaactctatacagcaggggaaagtgactggacaggagaatct
gtattcgatgtccaagctgcagtttccggcaccgtagaacaaactgccaatatcaacgga
gcttggcacatcggcttcagcggagcgttaggaactggaggttggggattctatcaaccc
tcttatgatatggtcaacgctcatattgttgacgcaaacggattacctaaaatggatgat
tcttatcgtaatgatcctgcgttatcaactttagacgagaacaatttacctcacactgat
ttgaccgtctatacagaccctcgtttggatgtttctaccggtcgtttcgagactccattc
ttagattggacagtgccaaatgcgttggatggttgggtacgtgatgtttctaacggaggt
ttatacctaaacaagaagaatatccctagaaaagccgataaaggaagcttatctaacacg
acgcaaacaaactccactgctaaaaacttccacttgatccgttacgcagacgtattgctt
tggtacgctgaaaccttgatcgagttaggacagcctcaacaagcaggtgaatacattaat
caagtacgtgctcgtgccgccaatagctatgtaaaggcagtagatccggcaacaatgacc
gaggctagttctacttatgttttggatgacaagattaacgggaagcaaagtacagatgct
gccgcaaactatcgtataggtttatatccaccttctcaattcgcatcaaaagacaaagcg
ctggaggcactgcgttgggaacgtcgtatcgagttagcgatggaaggtcatcgctggtat
gacttagctcgctggggtatcgcatccgaggtattaaatgatttcgtgaaatacgaagct
aagcatttaggtaaatattccaatagtacatacaacgcaaaatgggcaacaatgcctatc
cctcataatgaaatcttaaagatggatggtcttttagttcagaatgaaaactggaaataa
DBGET
integrated database retrieval system
