Parabacteroides sp. CT06: CI960_01045
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Entry
CI960_01045 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_01045
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_01045
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Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_8
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AST52067
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Position
290371..292245
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AA seq
624 aa
AA seq
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MKKVLIYFAMAVVLALGSTSCSDFLEIEPVGAVNETNLTDQEGINYLLTGMYSALNIPAA
TTNSYFGASLTNYTYGDVMGGDANKGSTAADQSDFTLLETFSFTTDNSYIKRKWVAVYDA
VARANNVMHLAGLIKDELSAIPGQEKDFYTEAIAQARFMRGFYLFEGIKNFGAAIPYVSL
EDYESSVNPLISNVDESGNYIYIWEQVAEDLQYAYDNLPGAWPEEPGRANKWAAGAFLAK
LRIFQSSPYNGTNGTSNKWTEAKSILETVIANGTDSKGTKYTLTPSYETLYTAGESDWTG
ESVFDVQMAISGTQYYTNAINGNSHISLSGKIGSGWGFYQPSYDLVNAHMVDENGLPYLD
KSYQSKTSVTTIDGDNVPHTDLTVYTDPRVDVSAGRFNVPYMDWDIPVTIDGWIRDLANG
GPFLNKKNLPKKADKGGLSLTTTGGSTAKNFHLMRVAELYLLYAEACIETGDINTAREYI
NKVRARAAQSCIMAADANNNMALTSSPYVLEDKVSGNTIANTAANYRIGLYPASGWTVDK
AIKALRFERRIELAMEGHHWYDLVRWNAASEELGNKGSGFLAYEKRYLLKYQSATYPDRL
VTLPIPNDEIVTMEGVLVQNENWK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttcttatatattttgcgatggcggtggttctcgcgttaggcagcacatct
tgttccgatttcttggaaatcgaacctgtaggtgcggttaatgaaaccaatttaacggat
caggaaggtattaattatcttcttaccggcatgtattcagcgttaaatattccggcggct
acgacgaactcttattttggggcaagcttgacaaactatacgtatggtgatgtgatgggc
ggtgacgctaataaggggtcaacggctgcggaccaatcggacttcacgttgttggagact
tttagctttacgaccgataattcctatatcaagcgtaaatgggtggcagtatacgatgcg
gtggctcgtgctaataatgtcatgcatttggccggtttgattaaagatgagctttccgct
ataccgggacaggagaaagatttttataccgaggccatagcccaagctcgtttcatgcgt
ggtttttatttgtttgagggtatcaagaattttggggcggctattccttatgtatctttg
gaggattatgagtcgtccgtgaacccactgatatcgaatgtggatgagagcggtaactat
atttatatttgggaacaggtggctgaagatttgcagtatgcttatgataatcttcccggc
gcatggccggaagagcccggtcgtgccaacaaatgggcggctggagcgtttttggcgaaa
ctgagaatattccagtcttctccctataatggaacgaatggaacctccaacaaatggacg
gaggctaaatcgattttagaaacggttatcgctaatggtacggatagcaagggcacgaaa
tataccttgaccccgagttatgagacgctttacacggcgggcgagagcgactggacgggc
gagtctgtgtttgacgtccagatggcaatctccggtacgcagtattataccaacgcgatc
aatggtaactctcatatctcattgtctggcaagattggttccggctggggattctaccag
ccttcttatgacttggtgaatgcgcatatggtggatgagaatggattgccttatctcgat
aagtcgtatcaaagcaaaacctcggttacgacaattgatggcgataatgtacctcatacg
gatttgacggtttatacggatcctcgggttgacgtatctgcgggtcgtttcaatgtgccc
tatatggattgggatataccagttactatcgatggctggattcgtgatttggcgaatggc
ggtccgttcttgaataagaagaacctgccgaaaaaggcggataagggaggcttgagcttg
actacaaccggtggctcaactgccaagaacttccacttgatgcgtgtagctgagctttac
ctgctttatgctgaggcttgtatagaaacgggtgatatcaatactgccagagaatatatc
aacaaagttcgcgcacgtgccgcacaaagttgtatcatggctgccgacgcgaataacaat
atggctttaacttcttctccatatgtattggaggataaggtgagcggaaataccattgct
aatacggcggctaattatcgcatcggcttgtatcctgcgagtggctggacagtggataag
gcgataaaagccttgcgtttcgagcgtaggatcgagttggcgatggaggggcatcattgg
tatgatcttgtgcgctggaatgcggcttctgaggagctgggtaataaaggttcgggcttc
ttggcttatgaaaagagatatttgctgaagtaccaatcggctacgtatccggatagatta
gtgacacttccgatccctaacgatgaaattgtcaccatggaaggcgtattagtccagaat
gagaactggaaataa
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