Parabacteroides sp. CT06: CI960_01110
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Entry
CI960_01110 CDS
T05011
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_01110 (topA)
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_01110 (topA)
Enzymes [BR:
parc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CI960_01110 (topA)
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Topoisomerases
CI960_01110 (topA)
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CI960_01110 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SHOCT-like_DUF2089-C
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AST52079
UniProt:
A0A223HI14
LinkDB
All DBs
Position
305754..308102
Genome browser
AA seq
782 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDYKVMSSYGHIRDLKTKDFSIDLEHNYAPEYVIPSDK
KKLVTELKNEAKKAEQVWLASDEDREGEAISWHLYEVLGLKPENTKRIVFHEITKNAILH
AIETPRDINIDLVNAQQARRILDRIVGFELSPILWRKVKPALSAGRVQSVAVRLIVERER
EINEFVSEAAYRVIASFILPDGTTILKAELNRRLKDKEEVEAFLESCKDASFTIDDISKK
PVRKTPAPPFTTSTLQQEAARKLGYSVSQTMMIAQRLYESGLITYMRTDSVNLSDLALGT
AKEAILDTYGEKYYKFRQYHTKSKGAQEAHEAIRPTYISNDEISGTAQEKRLYELIRKRT
IACQMADAELERTTISVGIGGKKEKFVATGEVITFDGFLQVYRESFDDENEKEQENGLLP
PVTLNEVLSMKDIVATERFTQRPPRYTEASLVRRLEELGIGRPSTYAPTIQTIQNREYVV
KGDKEGTERTYNIITLAQHTIKEVQKTEIVGADRNKLMPTDIGTVVNDFLMEYFPGVMDY
NFTASVEKEFDAVAEGEMVWTDAIDKFYKLFHPIVEEAASVRTEHKVGERELGIDPKSGK
PVFVKIGRYGPVVQIGQAHPEDKEAPKPQFATLMKGQSIETITLEEALKLFDLPRTIGEY
EGKVMVAAVGRFGPFIRHDGKFVSIPKGLNPLSITAEEAIELIEAKKQKDEQRFIKKFDE
DPEMEILNGRFGPYISYKKKNYRIPKTIEKPENLTLEECQKIIAEAGEKPAATKKRTTRK
KA
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaatttggtaatagtggagtcaccagccaaggcaaaaaccatcgagaagttc
ctcggaaaggactataaggttatgtctagctatggtcatatccgcgacttgaaaacgaaa
gatttcagtatagacctcgaacacaattatgccccggaatacgtgattccctcagataag
aagaaactcgtgaccgaattgaagaacgaagccaagaaagccgagcaggtttggttggct
tccgatgaggaccgggagggagaggccatctcttggcatttatatgaggtattaggattg
aaacctgagaatacgaaacgtatcgtttttcatgaaattaccaagaacgctatattacat
gcgattgagacgccgagagatatcaatatcgatttggtgaacgcgcagcaagcccgtcgt
atcttagaccgtatcgtgggtttcgagctatcccccattctttggcgtaaggtgaagccg
gctttatccgcggggcgcgtgcaatcggttgccgtacgtctgatcgtagagcgggagcga
gagatcaacgagtttgtctcggaggccgcctaccgtgtgatcgctagctttatcttgccg
gatggtacgacaatcctcaaggcggagctgaaccgtcgtttgaaagataaggaagaggtg
gaggcattccttgaatcttgcaaggacgcttctttcacgatcgatgatatctcgaaaaag
ccggtgcgtaaaacaccagcccctccttttacgacatctaccttgcagcaggaggccgcc
cgtaagttgggttattcggtctcgcagaccatgatgatcgcccaacgcctgtatgagtcc
ggattgatcacgtatatgcgtactgactccgtgaacttaagtgatttggctttggggacg
gcaaaagaggctatcttggatacctacggtgagaaatattataaattccgtcaatatcat
accaagagcaagggagcgcaagaagcgcacgaggcgattcgtccgacctatatcagcaat
gatgagataagcgggaccgctcaggaaaagagattatacgaattgatccgcaaacgtacg
atcgcttgccagatggcggacgccgagttggagcgtacgacgatctccgtaggcatcggc
ggcaagaaagagaagttcgtggctaccggtgaggtcattacttttgacggtttccttcag
gtgtaccgcgagagttttgatgacgagaatgagaaggaacaggaaaacggccttcttcct
ccggttaccttgaacgaggtattgagtatgaaggatatcgtcgctaccgaacgtttcacg
caacgtcctccccgctatacggaagcaagtttggttcgccgtttggaggaattgggaatc
ggtcgtccttctacctatgctcctacgatccagacgatccagaatcgagagtatgtcgtg
aaaggggataaggaaggaacggagcgtacttataatatcataaccttggctcagcatacg
atcaaggaagtccaaaagacggagatcgtaggagcggaccggaataagttgatgccaacc
gatatcggtacggtcgtgaatgatttcttgatggagtatttcccgggcgttatggattat
aacttcacggcgagcgtagagaaggaattcgatgccgtagcggaaggcgagatggtatgg
acggacgcgatcgataaattctataaactattccatccgatcgtggaagaggcagcctct
gtccgtacggagcataaagtgggtgagcgtgaattgggtatcgatccgaagagcggcaaa
cctgttttcgtgaagatcggtcgttatggcccagtcgtacagatcgggcaggcgcaccca
gaggataaagaggctcctaaacctcagttcgcaaccttgatgaaggggcaatctatcgag
acgattactttggaagaagccttgaaattgtttgatctaccccgtacgatcggtgaatat
gaaggtaaggtcatggttgccgctgtcggacgttttggcccgtttatccgtcatgacgga
aagttcgtatccataccgaagggcttgaatcctttgtcgataacagccgaggaagctatc
gagttgatcgaggcaaaaaaacaaaaagatgagcaacgatttatcaagaagttcgatgag
gatccggaaatggagatcttgaatggtcgcttcggcccttatatctcttataagaaaaag
aattacagaattcctaagacgatagagaaaccggagaacttgaccttggaggaatgccag
aagataatcgccgaggcgggagaaaaacctgctgcgacgaagaaacgtacgacacggaaa
aaggcttga
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