Parabacteroides sp. CT06: CI960_01155
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Entry
CI960_01155 CDS
T05011
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02024
Quorum sensing
parc03060
Protein export
parc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CI960_01155
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CI960_01155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI960_01155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
parc02044
]
CI960_01155
Secretion system [BR:
parc02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CI960_01155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AST52088
UniProt:
A0A223HI34
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Position
315845..318844
Genome browser
AA seq
999 aa
AA seq
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MQNKGFVKVFAVLLTLVCLFYLSFSFVTQHYNSKAAEYAGGDPAKESAYLDSLSTQKVWL
GYTLKQCREMEISLGLDLKGGMNVVLELNVADVIRSLSNNNQDENFNKALDLAYAHQATS
QKDFIDLFAEEYKKLDSGARLSAIFSTFELKDKITPQSSDAQVVSVLKQELQSAIDNSFN
VLRTRIDRFGVVSPNIQRLETAGRILVELPGVKEPERVRKLLQGSANLEFWETYKLPEIY
QQLVAADNVLATILSKEASADSVATDNVEKIADAADANVSEADSLLAELGQDKKDTEANQ
SMEEFAKQHPLFALLQISQYNGQLSPGSTVGIAQAKDMEKISEYLNMKQVKEVLPRNLAL
KWGVKAIDDKEQFFELYALKVTNRDGSPALGGDVVTDANADFMQQAGRSEQMVNMVMNAE
GSKAWARLTKENIGRQIAIVLDEMVYSAPNVNDEITGGRSQITGHFTPEEAKDLANVLKS
GKMAASVHIVQEDVVGPSLGQEAINAGVISFVLALVLLMVYMCAFYGLIPGLIADGALVL
NIFFTMGILASFQAVLTLPGIAGMVLTLGMAVDANVLIYERTKEELRAGKSLGKAIADGY
SNAFSAIFDSNLTSIITGIVLFYFGTGPIRGFATTMIIGLFASFLTAVFLTRIVYEALLA
KDKLKNVTFTTSITKDLLTNPKINFLGARKVGYLIPAAIIVLGAISFMTIGLNNGIDFTG
GRNYVIRFNQEVKTDDVRNMLDAQLDGSVSVIQIGTADQVRVSTNYKINDNDPTVDQEIE
NKLFEGVKSLLPEGTTLDEFTTTFIQSSQKVGPSMADDIKNSAILAVIFAMICMAAYILL
RFRDVSFSVGAFASVATTTLCIISFYTLLWKVLPFSMEVDQTFIAAILTIIGYSINDTVV
VFDRIRETIALYPKRDRYQVINDALNSTLCRTFNTSLTTLVVVLCIFILGGSTIRSFTFA
ILLGIIIGTYSTLFVATPIAYELQKKKINKKAAAEKAGK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggatttgtaaaggtcttcgcggtgttacttacgcttgtctgtttgttc
tatttgtcgttctcgttcgtgacgcaacattacaacagtaaagccgctgagtatgcgggt
ggagatcctgcgaaagagagtgcttatttagactcactatctactcagaaggtatggtta
ggctatacgcttaagcaatgccgtgaaatggaaattagtttaggtcttgacttaaagggc
ggtatgaacgttgtccttgagttgaacgtggcggatgtaatccgttcgttgtctaacaac
aaccaagacgagaatttcaacaaggcgttggatttagcttatgcgcatcaagcgactagc
caaaaagatttcatcgaccttttcgctgaggagtataagaagttggatagcggcgcacgt
ctttccgctattttcagtacattcgagttaaaagataaaatcacgccccagagctcagac
gctcaggttgtttctgttttgaaacaagagttgcagagtgcgattgataactcattcaac
gtattgcgtactcgtatcgaccgtttcggtgtggtttctccgaacatccaacgtttggag
acagcgggtcgtatcttggttgagttgccgggtgtgaaagaaccggaacgtgttcgtaag
ttgcttcaaggtagcgctaacttggaattctgggaaacttataagttgccggaaatctat
caacaattggttgccgctgataatgtattggctactatcctaagtaaggaggcttccgct
gattctgttgctaccgataatgttgagaaaatcgctgatgccgctgatgcgaatgtaagt
gaggccgattctttgttggctgagctcggtcaagataaaaaagatacggaagctaatcaa
agcatggaagagttcgctaagcaacatccattatttgctttattgcagattagccagtac
aacggtcagttgtctccgggttcgacggtaggtatcgctcaagcaaaagatatggagaag
atcagcgaatacctgaacatgaaacaagtgaaagaggtattgcctcgtaacttggcttta
aaatggggtgtaaaggcgatcgatgataaagagcagttctttgagttatatgccttgaag
gtaacgaaccgtgacggaagtcccgctttaggtggtgacgtagtaacagatgctaacgct
gactttatgcaacaagccggtcgttcagagcaaatggttaacatggttatgaatgccgaa
ggctctaaggcttgggctcgtttgacgaaagagaatatcggtcgccagatcgctatcgtt
ttggatgagatggtttattccgctccgaacgtaaacgatgagatcacgggaggtcgttca
caaatcaccggtcactttacaccggaagaggcgaaggacttagcgaacgtattgaaatcg
ggtaagatggctgcttccgtacatatcgttcaagaagatgtcgttggtccgtctttggga
caagaggctatcaatgccggtgtgatttctttcgttttggcattggtgctgttgatggtt
tatatgtgcgcattctacggattgattccgggattgatcgccgacggtgctttggtattg
aacatcttcttcacgatgggtatccttgcttctttccaagccgttcttaccttgccgggt
attgccggtatggtgttgacgctgggtatggcagtcgatgctaacgtattgatatatgag
cgtacgaaagaggaacttcgtgccggtaagtctttaggaaaggctatcgccgacggttac
agcaatgcgttctccgctatcttcgactcaaacttgacatctatcattaccggtatcgta
ttgttctatttcggtacgggtcctatccgtggtttcgctacgacgatgatcatcggtttg
ttcgcttcattccttacagccgtgttcttgactcgtatcgtttatgaggcattgttagcg
aaagataaattgaagaacgtgacattcacgacttctattacgaaagacttgttgacaaac
ccgaagatcaatttcttgggtgctcgcaaagtcggttatttaattccggcggcaatcatc
gttttaggtgctatctcttttatgacgatcggcttgaataatggtatcgatttcacgggt
ggacgtaattacgtgatccgtttcaatcaagaggtgaagactgacgatgttcgtaatatg
ctggacgctcagttagacggttctgttagtgttatccagatcggtacagctgatcaagta
cgtgtgtctaccaactataagatcaatgataacgatcctacggtagatcaagagatcgag
aataaattgtttgagggcgtgaaatccttacttccggaaggaactacattagatgagttc
acgactactttcatacagagttcgcagaaggtgggtcctagcatggcagacgatatcaag
aatagcgctatcttagcggtaatcttcgccatgatctgtatggccgcttatatcctgctt
cgtttccgtgatgtgtcattctctgtgggtgcgttcgcctctgttgctacgactacattg
tgtatcatttctttctataccttgttatggaaggttcttccgttctcaatggaggtagac
cagacgtttatcgcagctatcttgacgattatcggttactctatcaatgataccgtggtt
gtattcgaccgtatccgtgagacaatcgctttgtatccgaagcgtgatcgttatcaagtg
atcaatgatgcgttgaactctaccttgtgtcgtacatttaatacatcattgactacgttg
gtggttgtattgtgtatcttcatcttgggcggtagcacgatccgaagctttacgttcgct
atcttattaggtatcattatcggtacatactctactttgttcgtcgctactccgatcgct
tacgagttgcagaagaagaagatcaataagaaagctgctgctgagaaagccggaaaataa
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