Parabacteroides sp. CT06: CI960_02430
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Entry
CI960_02430 CDS
T05011
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parc03009
]
CI960_02430
Enzymes [BR:
parc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CI960_02430
Ribosome biogenesis [BR:
parc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CI960_02430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AST52312
LinkDB
All DBs
Position
complement(587861..588775)
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AA seq
304 aa
AA seq
DB search
MRKRSEYKGGDNRRKPSKERQVTVGESNTLLPFLFELLKEQSRSSVKGLLSRGQISVNGK
VTRQFDAPLNPNDTVGINYGRGKVEFNNPLLRIVWEDDDLIVINKREGLLSVSTDRIKER
TAYRILSDYLKECDPRNKIFVLHRLDRDTSGIMMFAKNQKVKEQLQSNWSEAITQRTYVA
VIEGRPEKDTDLIVSNLVENKHMQVYVTQDGDGKEAITRYRLLQTNNRYSLVELDLETGR
KNQIRAQMQSIGHPIAGDSKYGAETNPAGRLMLHARRLCFIHPVTGEEMRFETRIPEKFT
STAK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcgatctgagtataaaggaggggataatcgacgtaaaccctctaaagaacga
caggtaacggtgggtgaaagtaacactttgctacctttcctgttcgagttattaaaagaa
caaagccgttcatccgtgaaaggattattgagcaggggacagatctcggtaaacgggaaa
gtcacccggcagttcgatgccccgctgaaccctaacgatacggtcgggatcaactatgga
agagggaaggtggaattcaacaatccgttacttagaattgtttgggaagatgatgacctc
atcgtgatcaacaagcgggaaggtttgctatccgtatctaccgatcgtatcaaggagcgt
acggcctaccgtatactgagcgattacttgaaagaatgcgaccctcgcaacaagatattc
gtcttgcaccgtctggaccgagacacatcgggtatcatgatgttcgccaagaaccagaag
gtaaaagagcaactacagtccaactggagcgaggctatcacgcaacggacctacgtggcc
gtgatagagggacgaccggagaaagacacggatttgatcgtatccaacctcgtggagaac
aagcatatgcaagtgtacgtgacacaagatggtgacgggaaggaagcgatcacacgctac
cgactcctgcaaacgaacaatcgctattcgctcgtggaactcgatctggagacgggacgc
aagaaccaaatccgtgcgcagatgcaatccatcggccatccgatagccggagactctaaa
tacggggcggagacaaatcccgccggacgcttgatgctccatgcccgcaggctctgtttc
atccatccggtaacaggcgaggagatgcgcttcgagacacggatcccggagaaattcaca
tcgacagcaaagtaa
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