Parabacteroides sp. CT06: CI960_02755
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Entry
CI960_02755 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_02755
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_02755
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
SusD-like
TPR_14
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AST52364
UniProt:
A0A223HIW6
LinkDB
All DBs
Position
653969..655453
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AA seq
494 aa
AA seq
DB search
MKKVIMFSCIFMFSLFNIQCSFLDEKPIDRLVVDNFYSNQKDAQAAVDATYQQLHSIYNR
HMYMLCDLTCDGMKNGLGMPNAFLQNLEFLRHTPENTFIRDMWQNNYMGIMKANAAVNNI
PSVTMNPDLQKRFIAEAKFLRALYYFNLVRFFGDVPLVTQLETIDDAMGPRVAKEQIYEQ
ILSDLTDAENALPYPLEYGTTDIGRATKGAAKILAGKVYLTKGDYSKAKEKLAEVVEQEG
AYGYGLHVNYGDNWNLETEAGKEAVLYIEYKQDPFPKNDEMSMIGPKYSIPEPVGVNGSN
EADIPTIELNDKYNENDKRKAVNLRTHYTNPQNGKELISSIPLFGKYWQEGITAIKFCEI
NMHIIRYSDALLMYAEALNEIGESAKAHQVLNRVRERAFGDSSGNYSGLSKDAFREAILN
ERFLEFPIEGHRWFDLVRTGTFIKRMKEHSAYEAKVAEKNKTDIASNIKDHMILMPIPQR
ELDLNPELTQNPGW
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcataatgtttagttgtatatttatgttctcattattcaatatacaatgt
tcttttttggatgaaaaaccaatagatagattggttgtggataatttctattcgaaccag
aaagatgctcaagcggcagttgatgcaacttatcaacagcttcatagtatctataatcga
catatgtatatgttatgcgatcttacatgcgatgggatgaaaaatggcttgggtatgcct
aatgcttttttgcagaatttggaattcttacgtcacactccggaaaatacttttattaga
gatatgtggcaaaacaactatatgggtataatgaaagcgaatgcagctgttaataatatt
ccatcagttaccatgaaccctgatttgcaaaaaagatttatagcagaggcgaaattcttg
cgtgctctttattatttcaatttagtccgcttttttggagatgttcctttggtgactcaa
ttagagacaatagatgatgctatgggaccaagagttgcgaaagaacagatctatgaacag
attctatctgatttgacagatgcggaaaatgcccttccttatcccttagaatatgggact
acggatattgggcgtgcgacaaaaggtgctgccaagattttagcgggaaaggtgtatttg
acgaaaggtgattattccaaagcgaaggaaaaactggcagaggttgttgaacaagaaggt
gcttatggatatggcttacatgtgaactatggtgacaattggaacttggaaactgaagca
ggaaaagaagccgtgctttatatagaatataaacaagatccgtttcctaaaaatgatgag
atgagtatgattggaccgaaatattctattcctgaacctgtcggtgttaatggatctaat
gaagctgatatcccgacaatagaattaaatgataagtataatgaaaatgacaagcgaaaa
gcagtaaatctaagaactcattatacaaacccgcaaaatgggaaagagttaatatctagt
atccctttatttggcaagtattggcaagaaggtataactgctattaaattctgtgaaatc
aacatgcatatcatccgttattcagatgctttgcttatgtatgctgaggctttaaatgaa
atcggagagtctgcgaaggcccaccaagttcttaaccgtgttcgagaacgtgcatttggc
gattcttccggtaattattcgggcttgtccaaagacgcatttcgggaggcgatactaaac
gagcgctttttggaatttccgatagaaggacatcgttggttcgacctcgtacgtacaggt
acattcataaaacggatgaaagagcatagcgcatacgaagcgaaagttgccgaaaagaat
aagacggatattgctagtaatataaaggatcacatgatcctcatgccgattcctcaacgg
gaattggatttgaatcctgaactaacacaaaatccgggttggtaa
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