Parabacteroides sp. CT06: CI960_03840
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Entry
CI960_03840 CDS
T05011
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_03840
03036 Chromosome and associated proteins [BR:
parc03036
]
CI960_03840
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_03840
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CI960_03840
Chromosome and associated proteins [BR:
parc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CI960_03840
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CI960_03840
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HTH_CodY
Lmo2446-like_N
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AST56069
LinkDB
All DBs
Position
889878..890153
Genome browser
AA seq
91 aa
AA seq
DB search
MNRGELVQSLVEETGLPKNVVRAVVNALPTVVAKGIREGESISMKGFGSFVPWQQSERLA
RNPKTGEEVMITPRVSVKFKAGSDLLKELNE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaggagaattagtacaatctcttgtggaagaaacaggattgccgaaaaatgtt
gttagggccgtagtgaatgcgttaccgactgttgtggcgaaaggaatacgggaaggagaa
tctatttccatgaaaggatttggatcttttgtaccttggcaacaatccgagcgattggca
cgtaatccgaaaacaggggaggaagtaatgattactccacgtgtctcggtcaaattcaaa
gccgggagcgatttacttaaagaattaaatgagtaa
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