KEGG   Parabacteroides sp. CT06: CI960_06200
Entry
CI960_06200       CDS       T05011                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_06200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:parc03021]
    CI960_06200
Transcription machinery [BR:parc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI960_06200
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE UPF0122 Sigma70_ECF HTH_10 HTH_40 HTH_11 HTH_24 wHTH_Par HTH_23
Other DBs
NCBI-ProteinID: AST52965
LinkDB
Position
1401445..1402023
AA seq 192 aa
MADIDSEKERRLVADLLEGDESAFCELYALYKDRLMWFSLKFLKSRDMAEDVFQDAFASI
WQNRRFLNPNVPFGPYVYTIVKNRILNLLAGLDRELELRDKIRSASLDSTNETEDSVLDT
DLNALLDKALETLTPQQKRVFDMSRKDMKSHKEIADSLGISVYTVQQHISTALKVIRAFL
AKYAETYMKLLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atggcagacattgattcagagaaagaaagaaggcttgtggcggacttgctagaaggggac
gagtcggccttttgtgaattatatgccctgtataaggaccgcttgatgtggttttccttg
aaattccttaaatcccgggatatggcggaagatgtttttcaggatgctttcgcctctatt
tggcagaatcgccgtttcttgaacccgaatgtaccttttggcccgtatgtgtatacgatc
gtgaaaaatcggatcttaaacctgttggcgggactggatcgtgagttggagctgagggat
aagatacggtccgcctcattggatagcacgaacgagacggaggactcggtattggatacg
gatttaaacgcattgttggataaggcgcttgaaacgttgaccccacaacaaaaaagggtt
tttgatatgagccgtaaagatatgaaatcccataaggagatagccgacagtttgggtatc
tcggtatatacggtacaacaacatatctctacggccttgaaagtgatccgggcgtttctg
gctaaatatgcggagacttatatgaagctactgctctaa

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