Parabacteroides sp. CT06: CI960_06200
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Entry
CI960_06200 CDS
T05011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI960_06200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parc03021
]
CI960_06200
Transcription machinery [BR:
parc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI960_06200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
UPF0122
Sigma70_ECF
HTH_10
HTH_40
HTH_11
HTH_24
wHTH_Par
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AST52965
LinkDB
All DBs
Position
1401445..1402023
Genome browser
AA seq
192 aa
AA seq
DB search
MADIDSEKERRLVADLLEGDESAFCELYALYKDRLMWFSLKFLKSRDMAEDVFQDAFASI
WQNRRFLNPNVPFGPYVYTIVKNRILNLLAGLDRELELRDKIRSASLDSTNETEDSVLDT
DLNALLDKALETLTPQQKRVFDMSRKDMKSHKEIADSLGISVYTVQQHISTALKVIRAFL
AKYAETYMKLLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcagacattgattcagagaaagaaagaaggcttgtggcggacttgctagaaggggac
gagtcggccttttgtgaattatatgccctgtataaggaccgcttgatgtggttttccttg
aaattccttaaatcccgggatatggcggaagatgtttttcaggatgctttcgcctctatt
tggcagaatcgccgtttcttgaacccgaatgtaccttttggcccgtatgtgtatacgatc
gtgaaaaatcggatcttaaacctgttggcgggactggatcgtgagttggagctgagggat
aagatacggtccgcctcattggatagcacgaacgagacggaggactcggtattggatacg
gatttaaacgcattgttggataaggcgcttgaaacgttgaccccacaacaaaaaagggtt
tttgatatgagccgtaaagatatgaaatcccataaggagatagccgacagtttgggtatc
tcggtatatacggtacaacaacatatctctacggccttgaaagtgatccgggcgtttctg
gctaaatatgcggagacttatatgaagctactgctctaa
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