Parabacteroides sp. CT06: CI960_06250
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Entry
CI960_06250 CDS
T05011
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_06250
Transporters [BR:
parc02000
]
Other transporters
Pores ion channels [TC:
1
]
CI960_06250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
STN
CarboxypepD_reg
CooC_C
FecR_C
Motif
Other DBs
NCBI-ProteinID:
AST52974
UniProt:
A0A223HKN1
LinkDB
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Position
1414924..1418268
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AA seq
1114 aa
AA seq
DB search
MKISTLLSLAFACTVSASTYGQNYKLSMNKQDCSISEVLKEIEKNSEYTFFLNDNQVNVN
RKTSVKANNASLEEVLEQALKNTGYQYEIVDRQIIIKSKSVSSVSHPNALFQSSPRKITG
QVKDALGEPIIGANVVVKGTTNGTITDIDGNFSLEVPDNAILVVSYIGYTDRTVEVGNSS
KVMVSLSEDTQKLDEVVVVGYGTQKKVNLTGAISSLDAETLENRPITNSTQALQGTQGVY
VNQAGAQPGADGATIRIRGQGTLNDNNPLILVDGIEFPLEAVNPNDIESISVLKDAASSA
IYGSRAANGVVLVKTKGGKKGKFTVDYNNYFGVQQATYLPDFVYDPVVFMEMRNQAQRNE
GKLTVDYSDALIEEYKQGMLTDPIMYPQNNWLDIMYNNAFIMEHNMRFSGGDDKYTYSVS
LGYGDQNGVLRGTDSNKYTLAVNTTAQVNSRLKIGANINAHYQIYNEPVAGVANLVEMTY
KAQAFHPTYTADGRYADTFIRTPGHNIYRHPLALADEGENKHKSLRMLANLSAEYKLPFD
IVYNLNVGLNKYDYLQSRFAPDVYEYQLKTNEEKRVVYDGQNTRHAYKGDKNNLAVTVFN
TLSWGKKFNDAHDVKVLAGYSFESDDKTEFSAKVEGFLGNELHELNAGSSNPSVAGTSSR
SVLMSYFGRVNYGYKDRYLFEGNFRYDGSSRFAKGNRWGIFPSFSAGWRLSEEEFMKDIP
WIYNLKLRASWGQLGNERIDLFRYVDLMNLKVIKNDGSITDYNYPLNGAMQSGAAITAYN
DPNITWETTTMTNVGIDASLLNGNLDFSFEFFDKRTSDILRKVTLPDQVGGLDGPIRNIG
EVSNKGFELNMGYRNNIGDFRYEVNGNMTFIKNKIVSLKGQTIIDGMFILEEGKPIDSYY
MLHAIGIFQSEEEIKNSPYQTAATKPGYLKFEDTNGDGKITEDDRQIRGGVIPKITYGFN
INLGYKDWDLSAFFQGVTDVYTYGDRIGATPLWFGCGLPEQWLTDAWTPERGTSATLPIL
TTYEGCLNENFRTNDFWLRNASYLRLKNLQLSYNVPVSFLKSGVVKRLKVFVNAQNLFTF
SPMKDFDPEKNLKGSNWYAYPSVRTYTAGVNVTF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagtacgttgttatccttggctttcgcatgtactgtatccgcttctacctat
ggacagaattataagctttccatgaataaacaggattgcagtatatcggaagtgctaaaa
gaaatagagaaaaatagtgagtacacgttcttcttgaatgataatcaagtaaatgtaaat
aggaaaacgagtgtaaaagcaaataatgcctcgttagaggaggtcttagagcaagccttg
aaaaatacgggataccaatatgagattgtagaccggcagattataattaagtcaaagagt
gtttcaagtgtctcacatccgaatgccttattccagtcttcgccacgaaagattaccgga
caagtaaaagatgcgttgggagaacccattatcggggcgaatgttgtcgttaaaggcact
acgaacggaacgattacggatatcgatggaaacttcagtctggaagtaccggacaatgcg
atcttggtagtttcttatatcggttatacggatcgtacggtcgaggtcggtaattcttcg
aaagtaatggttagcctgtccgaggatacccagaagttggatgaggttgtggtcgtaggt
tacggaacgcagaagaaagtgaatttaacgggagcgatctcctctttggatgcggagacg
ttggagaatcgcccgatcaccaactcgacccaagcgttgcaaggtacgcaaggtgtttac
gtaaatcaagcgggtgctcagccgggagcggacggggcgacgattcgtattcgtggtcag
ggaaccttgaacgataataacccgttgattttggtggatggtatcgagttcccgttggaa
gcggtaaatccgaatgatattgagagtatttccgtattgaaagatgcggcttcttccgct
atctacggttctcgtgcggcgaatggcgttgtcttggtaaagacaaaggggggaaagaaa
ggtaagtttaccgtcgattataataattattttggcgtgcagcaggctacctatctgccg
gatttcgtatatgacccggtcgtatttatggaaatgagaaaccaagcgcaacggaacgaa
ggtaaactaacggtggattattctgatgcgttaatcgaggagtacaaacaaggtatgttg
acagacccgattatgtatccgcagaataattggttggatatcatgtataataatgccttt
atcatggagcataacatgcgtttctccggaggtgatgataaatatacgtattccgtatct
ttaggttatggcgatcaaaatggagtattgcgtggtacggactccaataaatatacttta
gccgtgaatacgactgctcaggtaaatagccgtttgaagatcggcgctaatatcaatgcg
cattatcagatctataatgagccggtagcgggtgtggcaaacttagtggagatgacttat
aaagcgcaggctttccacccgacttatacggccgatggtcgctatgcggatacttttatc
cgtactcctgggcataatatctatcgccatccgttggcgttggccgatgagggcgagaac
aagcataagtccttgcgtatgttggcgaatttgtctgcggaatataagcttccgtttgat
atcgtttataacttgaatgtcggtttaaacaaatatgattatctgcaatctcgttttgcg
cctgatgtatacgaatatcagttgaagaccaatgaggagaaacgagtggtttatgacggt
cagaatacacgccatgcttataaaggtgataagaataacttggcagttacggtattcaat
accttatcttggggcaagaagttcaatgatgcccatgacgtaaaagtcttggctggctat
agttttgagagtgatgataagactgaattttccgctaaggtagaaggtttcttagggaac
gagttgcacgaattaaatgcgggttctagtaatccgagtgtagcgggcacttcctcgaga
tcagtcttgatgtcttattttggtagggtgaattatggttataaagaccgttatttattt
gagggtaactttcgttatgatggttcgtcccgttttgccaaaggaaatcgttggggtatt
ttcccttcattctctgccggatggcgtttgagcgaggaagaatttatgaaagatattcct
tggatctacaatctgaaattgagagcttcttggggacaattgggtaacgagcgtatcgat
ttgttccgctacgtggacctaatgaacttgaaggtgataaaaaatgatggttcaatcacg
gattataactacccgttgaatggagcgatgcaatccggagcggctattaccgcttataac
gatccgaacattacatgggagacaacgaccatgacgaatgtcggtattgacgctagctta
ttaaacggaaacttggatttctctttcgagttctttgataaacgtacttccgacatcttg
cgtaaggttactttgccggatcaagtaggtggtctggatgggccgatccgtaatatcggc
gaggtgagcaataaaggtttcgagttgaatatgggatatcggaacaatatcggggacttc
cgttacgaggtaaatggaaatatgacctttatcaaaaataagatcgttagcttgaagggg
caaacaatcattgatggaatgtttatcttggaagaaggaaagcctatcgattcttattat
atgcttcatgctatcggtattttccaatctgaggaggaaatcaagaatagtccgtatcaa
accgcggctactaaaccgggatatctgaagtttgaggatacgaatggagatgggaaaatt
accgaagatgaccgccagatacgtggtggtgtgattcctaagataacttatggattcaat
atcaacttaggatataaggattgggatctgagcgctttcttccaaggtgtaactgatgtc
tatacatatggagaccgcattggtgctactcctttatggtttggttgtggtttgccggaa
caatggttgacggatgcttggactcccgagcggggaaccagcgctacattgcctatcttg
actacatatgaaggatgcttgaatgagaatttccgtacaaatgatttctggttgagaaac
gcctcttatttacgtttgaagaacttgcaactttcttataacgtaccggtctctttcttg
aaaagcggtgttgttaagagattgaaggtctttgtcaatgcgcaaaacttattcacgttc
tctccgatgaaggattttgatccggagaagaacttgaagggaagcaactggtatgcctat
ccgtctgtacggacttatacggcaggtgttaatgtcacattttaa
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