Parabacteroides sp. CT06: CI960_06255
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Entry
CI960_06255 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_06255
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_06255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
SusD-like
TraQ_transposon
Motif
Other DBs
NCBI-ProteinID:
AST52975
UniProt:
A0A223HKK3
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All DBs
Position
1418287..1419792
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AA seq
501 aa
AA seq
DB search
MRRKIYKMICVAVACMSLTACDSWLDVDPSDQYSTETFWKTKEHASAGIMGCYNALKPWR
SLHTMEFDMLTANAMPYNEANGTQAIGKGEHLSTTALIGSLWKNCYVGIGRTNTFIANVG
GVDMDESEKAKMVGEAKFLRAFYYLSLVDKFGGVPLIIDAPNADEQAELPRNSKEEVVNQ
IVKDLEEAAAVLPDTYASSDLGRATKGAALALKARTLLYNSRWAEAAQAAKQVMESGVYQ
LFNDYRHFFSEDNKYNCEVIFDIEAKLPEYPTDYDQNIWRLNRPAPLKELVDTYLCVDGK
TIEESPLYDPTRPYENRDPRLLKSIVCIGYPYLGKTITKEDVATTGFGVKKYTSYEDDVT
IPLVERSAFNFILIRYAEVLLTYAEAQNEASGPDQSVYDAINQLRRRPDINMPEVPKGLT
KDQMREVIRRERRIELTFEGLYYSDILRWKTAEKENNGMMHNYEGIEVVKRSFNPKRDYL
WPIPYNQTVLNPNLEQNPNWD
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtaaaatatataagatgatatgtgtcgctgtcgcttgtatgagtttaaccgct
tgtgatagctggttggatgtagatccttccgatcaatattccacggaaacattctggaag
acaaaagagcatgcgagcgccggtataatgggatgttacaacgcattgaaaccttggcgt
tcattgcatacgatggaattcgatatgttgacagcgaatgcgatgccttataacgaggcg
aatggtacgcaagcaattggaaaaggtgaacatttgtctactacggctttaatcggaagc
ttatggaagaactgttacgttggcattggccgtacgaatactttcatcgctaatgtcgga
ggtgtcgatatggacgagtcggagaaggcgaagatggtgggtgaagccaagttcttacga
gctttctattatttaagtctggtcgataaattcggaggtgtgccactgattatagatgct
cccaatgcggatgagcaagccgaattacctcgcaattccaaggaagaggtagtgaatcag
attgtcaaggatttggaggaggccgctgccgtgctaccggacacctatgctagctcagac
ttgggacgtgcgacaaaaggtgctgcgttagcgttaaaagcccgtactttattatataat
tctcgttgggcggaggcggcccaagctgctaagcaggtaatggagtctggcgtttatcaa
ttattcaatgattatcgtcatttctttagcgaagataataaatataattgtgaggtaatc
tttgatatagaagcgaaattgccagagtatccaacggattatgatcagaatatctggcgc
ttgaatcgtccggctcccttgaaggaactggttgatacatatctctgtgttgacgggaag
acgatagaagagtcaccactttatgatccgactcgtccgtatgagaacagagatccccgt
ttattgaaatcgatcgtttgcatcggttatccgtatttaggaaagacgatcacaaaagaa
gatgtggcgactacgggtttcggtgtgaagaaatacacttcttatgaggatgatgtaacg
attcctttagtagaacgttcggctttcaatttcattttgattcgttatgcggaagttctg
ttgacgtatgccgaggcgcagaatgaggcgagtggtcctgatcagtcagtttatgatgcc
atcaaccaattgcgtaggcgtccggatatcaatatgccggaagtaccaaaaggtttgacg
aaagatcagatgcgtgaggtaatccgccgtgaacgccgtatcgagttgacctttgaagga
ctctactattcggatatcttgcgctggaaaaccgccgagaaagaaaataatggtatgatg
cataattatgagggaatagaagtcgtgaaacgttcttttaatccgaaacgagattattta
tggccgatcccttataaccaaacagtcttgaaccctaatttggagcaaaatccgaactgg
gattaa
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