KEGG   Parabacteroides sp. CT06: CI960_07430
Entry
CI960_07430       CDS       T05011                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
parc  Parabacteroides sp. CT06
Pathway
parc03030  DNA replication
parc03430  Mismatch repair
parc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:parc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CI960_07430
   03430 Mismatch repair
    CI960_07430
   03440 Homologous recombination
    CI960_07430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:parc03032]
    CI960_07430
   03400 DNA repair and recombination proteins [BR:parc03400]
    CI960_07430
Enzymes [BR:parc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CI960_07430
DNA replication proteins [BR:parc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CI960_07430
DNA repair and recombination proteins [BR:parc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CI960_07430
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2 Rv2179c-like QSregVF_b
Other DBs
NCBI-ProteinID: AST53186
LinkDB
Position
1711298..1712068
AA seq 256 aa
MQLNLRNPLVFFDLETTGINIVKDRIVEISYVKVFPNGKEETKTRRINPGMPIPPESTAI
HGITDEDVKDCPTFKEIAKSLATQIEGCDLAGYNSNRFDIPMLAEEFLRAGVDIDLNRRK
FIDVQTIFHKMEQRTLSAAYKFYCNKSLENAHTAEADTLATYEVLKAQLDRYPDLKNDVA
FLSQYSCYSNNVDFAGRMVYNDKGEEVINFGKYKGRLVTEILKSDPGYYSWIMNGDFPLN
TKKMLTEIRLRDFNSK
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcagttaaacttaaggaacccgctggtcttttttgatttagagaccacgggtataaat
atcgtaaaggaccgtatcgtagagatttcctacgtgaaggtcttcccaaatgggaaagaa
gaaacgaagacacgccggataaatcccggtatgcctattccccccgaatctaccgctatt
catggcataaccgatgaagatgtaaaagattgtccgacctttaaggagatcgctaaatct
ttggcaacccagatcgagggttgtgatttggccggatataattccaaccgttttgatata
cccatgcttgccgaggagtttctgcgtgcgggtgtggatatcgatttgaaccggcgcaaa
tttatcgatgtacagacgattttccataagatggagcaacgtacgttatctgccgcttat
aaattctattgcaataaaagcttggagaacgctcatacggctgaggctgatacgttggct
acatatgaggtgttgaaagcgcagctggatcgctatccggatttgaagaatgacgttgct
ttcctttcccaatattcctgctactcgaataatgtggatttcgccggacgtatggtttac
aacgataaaggcgaggaggttattaacttcggtaagtataaaggccgtttggtaacggag
atcttgaagtcggatccgggttattattcttggatcatgaatggcgatttcccgttgaat
acgaagaaaatgttgacagagatccgtttgagagactttaattcaaaataa

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