Parabacteroides sp. CT06: CI960_07970
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Entry
CI960_07970 CDS
T05011
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03030
DNA replication
parc03430
Mismatch repair
parc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI960_07970
03430 Mismatch repair
CI960_07970
03440 Homologous recombination
CI960_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_07970
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_07970
Enzymes [BR:
parc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI960_07970
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CI960_07970
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CI960_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_B_exo1
KMP11
PHZA_PHZB
Motif
Other DBs
NCBI-ProteinID:
AST53291
LinkDB
All DBs
Position
complement(1839710..1840288)
Genome browser
AA seq
192 aa
AA seq
DB search
MKLLFFDLETTGIKYWRNGVHQISGEIVIDGVTKESFNFNVCPHPQCEIEEEALRICNVS
KEQIQAYPPMREVYVKFVNMLSKYVDKFDKKDKFFLVGYNNASFDNHFLKAFFVQNGDNY
FYSWFWVNSIDVMVLSTQHLMRKRHEMTDFKQETVARALGIQIDSAKLHDASYDIQLTKE
IYNRISSLSFMG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacttttttttgatttagagactaccggcataaaatactggagaaatggcgtc
caccaaataagtggggagatcgtaattgatggggttacgaaggaatcttttaatttcaat
gtctgcccgcatccccaatgtgagatagaggaagaagcgcttcgtatttgtaacgtgtcc
aaggaacagatacaagcttatcctcccatgcgagaggtgtacgttaaatttgtgaacatg
ctgtccaaatacgtggacaaatttgataaaaaagacaagttcttcctcgttggatacaac
aacgcctctttcgataatcacttcttgaaagccttcttcgtacagaacggagataattat
ttctactcatggttctgggtgaactcgatcgacgtaatggtattgtctacccagcatttg
atgcgcaaacggcatgagatgacagatttcaagcaggaaacggtggcaagggctttaggt
atacaaatagattccgcgaaattgcacgacgcgtcctatgatattcaattaaccaaagaa
atttataataggatatcctccctctcatttatgggttga
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