Parabacteroides sp. CT06: CI960_08420
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Entry
CI960_08420 CDS
T05011
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_08420
03036 Chromosome and associated proteins [BR:
parc03036
]
CI960_08420
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_08420
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CI960_08420
Chromosome and associated proteins [BR:
parc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CI960_08420
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CI960_08420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Sigma70_r3
RRM_ESF1
HU-CCDC81_euk_1
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AST53376
LinkDB
All DBs
Position
1942430..1942732
Genome browser
AA seq
100 aa
AA seq
DB search
MELDMKNKELITELANRMDWTSKEVSDMLSALSSVVSSKLVDNDTIYLQGFGQFEVKKKA
ERISVNPANGKRYLVPPKLVPVFKPGTTVKNRLKELGDHE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggaattagatatgaaaaacaaggaacttataacggaattggcgaatcgcatggattgg
acctcgaaggaggtatccgacatgctttctgcgctcagttccgtcgtaagttcgaaatta
gtggataacgatacgatctatctgcaaggcttcggccagttcgaggtgaaaaagaaagcg
gaacgtatttccgtgaatccggcgaacgggaagcgatatctggttccccctaaattagtt
cccgtgttcaagcccggaacgaccgtgaagaatcgtttaaaggaattgggtgatcatgaa
taa
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