Parabacteroides sp. CT06: CI960_08865
Help
Entry
CI960_08865 CDS
T05011
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
parc01011
]
CI960_08865
Enzymes [BR:
parc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CI960_08865
Peptidoglycan biosynthesis and degradation proteins [BR:
parc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CI960_08865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AST53459
UniProt:
A0A223HM19
LinkDB
All DBs
Position
complement(2040201..2041586)
Genome browser
AA seq
461 aa
AA seq
DB search
MYRKYVPFLLFLFFLYGCNGNKQEEKEDVSVFVDLPQLKAEGEITAVTLYSSTSYFQYKM
QPMGYEYDLINDFAKSQGLKLNIKVAENPARLIEMLEAGEVDVVAYPIPINNKLKQEVIY
CGREDISSQVLIQRANKGDKLLTDVTQLIDKNVYVKPNTKYSERLKNLDEELGGGIHIQK
VENDSIATEDLIEMVSLGEIPYTISDDNTARLNKTYYWNINVDLKVSFPQRSSWGVRKSS
PDLAKAIDEWASDKTGKHSFKAVTKRYFELSKQPFTADIPEVKNGHISPYDPLFKKHAKN
IGWDWQLLASISYQESHFNPTVVSWAGAEGLMGIMPNTAKALGVTPHELKDPDTGIRTGV
DCLRRFRQGFSEITDPEEKVKFTLAAYNAGIGHIYDAQRLARKYGKDPNKWDNNVAEYIR
LKNDPEYYNDPVCKHGYLRGSETYNYVREVLERYHYYKKKS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtataggaaatacgtcccctttctgctctttttgttcttcttgtatggttgcaacggt
aacaaacaagaggagaaagaggacgtttccgttttcgtggatttaccgcaactgaaagcg
gaaggcgagatcacggcggtgactttatacagttctacctcctacttccaatataagatg
caacccatgggttacgaatacgatctgataaacgattttgccaagagccaaggtttgaaa
ttaaacatcaaggtcgccgagaatcctgcccgtctgatcgagatgctagaagccggcgag
gtcgatgttgtagcctaccctatcccaatcaataacaagctgaaacaagaggtcatttat
tgcggccgggaggatatctccagtcaagtattgatacaacgggccaataaaggcgataag
cttcttaccgatgtcactcaattaatcgataagaatgtttacgtaaagcctaacaccaaa
tactccgaacgactgaagaacttggatgaggaactcggcggaggaatccatatccaaaaa
gtggaaaatgactccattgctaccgaagatcttatcgagatggtctccttgggcgaaatt
ccctatacgatcagcgatgataacaccgcccgcctaaacaagacttattattggaatatc
aatgtcgacctaaaggttagttttccccaacgctcttcatggggggtaaggaaaagtagt
ccggacttggcgaaggccatcgatgaatgggcttctgataaaacgggtaaacattctttc
aaggcagttactaagcggtactttgaattaagcaagcaaccttttaccgcagatattccg
gaggtaaagaatggacatatttccccgtatgaccctttattcaagaaacatgcgaaaaac
atcggatgggattggcagctgttggcgtctatttcctatcaagagtctcatttcaatcct
acggttgtatcgtgggccggtgccgaggggcttatgggaatcatgccaaatacagcgaag
gcattaggtgtcaccccgcatgaattgaaagatccggatacgggaatccgtacgggagta
gattgtttacggcgcttccgtcaaggtttttctgagattacggatcctgaagaaaaagtc
aagtttaccctagcggcttacaacgctgggatcggacatatttacgatgcgcagcgattg
gcccgaaaatatggaaaagatcccaataaatgggataataatgtagcggaatatattcgt
ttgaaaaatgatcccgagtattataacgatcctgtttgcaagcatggatacttgcgtggc
tcagaaacatataattacgtgcgggaagtgttggagcgttatcattactacaagaaaaag
tcatag
DBGET
integrated database retrieval system
