Parabacteroides sp. CT06: CI960_09015
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Entry
CI960_09015 CDS
T05011
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc00730
Thiamine metabolism
parc01100
Metabolic pathways
parc01240
Biosynthesis of cofactors
Module
parc_M00896
Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CI960_09015
Enzymes [BR:
parc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CI960_09015
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AST53488
UniProt:
A0A223HM56
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Position
complement(2077576..2079273)
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AA seq
565 aa
AA seq
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MATKKNMRISYPSSEKIYVPGEINKIKVGMRKIKLLDTVTLDEHGERIFKKNNPVIVYDT
SGPYSDPKISIDIVKGLPRIREEWYGKRKDVVQLPELTSAYGRERLADASLDSLRFPKRY
LPFRAKEGKNITQMYYAKKRIITPEMEYVAIRENQQIEALGLKSYITPEFVRKEIAAGRA
IIPANINHPEAEPMIIGKKFLVKINTNIGNSALSSGIDEEIEKAIWSCKWGGDTLMDLST
GDHIHETREWIIRNCPVPMGTVPIYQALEKVSGKVEDLSWEIYRDTLIEQAEQGVDYFTI
HAGLLRKHVELTATRLTGIVSRGGSIMAKWMQLHDEENFLYTHFAEICEILKAYDVAVSI
GDGLRPGSIYDANDAAQFAELHTMGELTKIAWEQFVQVIIEGPGHVPMNKIHENMKEQQY
ACHGAPFYTLGPLTTDIAPGYDHITSAIGGAQIAWHGTAMICYVTPKEHLGLPNKEDVRN
GVVAYKIAAHAADLAKGHPGAQVRDNALSKARFDFRWKDQFNLSLDPERALQYYKESAVT
DGEYCTMCGPNFCAMRLSKDLQGCK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaaaagaatatgcgtatttcctatccgtcctcggaaaagatttatgtcccg
ggcgagatcaataagatcaaggttggtatgcgtaagattaaattgttggacacggtaacc
ttggatgagcatggagagcgaatcttcaagaagaacaatccggtaatcgtttacgatacg
agcggcccgtattccgaccccaagatatcgattgatatcgttaaaggacttcctcgtata
cgtgaggagtggtacggtaagcgtaaggatgtggttcaattgccggaattgacttccgct
tatggccgtgagcgattggcggacgcgagtctggattccctgcgtttccccaagcgatac
ttgcctttccgggctaaagagggtaagaatatcacccagatgtattatgcgaagaagcgc
attatcactccggaaatggagtacgtggcgattcgtgagaaccagcaaatcgaggctttg
ggactgaagtcttatatcacgccggagttcgtccgcaaggaaatcgccgccggtcgcgcg
atcatcccggcgaatatcaatcacccggaagccgagccgatgattatcggtaagaagttc
ttggtaaagatcaataccaatatcggcaactccgctctttcctccggtatcgacgaggag
atcgagaaggctatatggagttgtaaatggggcggagacacgttgatggatctctctacc
ggcgatcatatccatgagacgcgcgagtggattattcgtaactgcccggttccgatgggt
acggttcctatttatcaagccttggagaaggtgagtggtaaggtagaggacctttcttgg
gagatctatcgggatacgttgatcgagcaggcggaacagggcgtggattatttcacgatc
cacgcgggtttgttgcgcaagcatgtggagctgacggcgactcgcttgacggggattgtc
tccagaggcggatctatcatggccaaatggatgcagcttcatgacgaggaaaacttcctg
tacacacatttcgccgaaatctgcgagatactaaaggcatatgacgtggcggtctctatc
ggagacgggcttcgccccggttctatctatgacgcgaacgacgcggcacaattcgccgag
cttcacacgatgggagaactgacgaaaatagcttgggaacagttcgtgcaagtgattatc
gaaggcccgggccatgttcccatgaataagatccatgagaatatgaaggaacaacagtat
gcctgccatggagcgccgttctatacgctgggcccgttgacgaccgatatcgctcccgga
tacgatcatatcacgtcggctatcggtggcgcgcaaatcgcttggcatgggacggccatg
atctgctacgttacgccgaaggagcatttgggattgccgaataaggaagacgtgcgtaat
ggggtggtcgcttataagatagcggcgcatgccgctgacttggcgaaagggcatcccggc
gctcaagtacgtgataacgcgttgagcaaggcacgttttgatttccgctggaaagaccag
ttcaatttgtccttggacccggaaagggctttacagtattataaggagagtgctgttacg
gatggagagtactgtacgatgtgcggtcctaatttctgcgctatgcggttaagtaaggat
ttgcaaggttgtaaataa
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