Parabacteroides sp. CT06: CI960_09375
Help
Entry
CI960_09375 CDS
T05011
Name
(GenBank) helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
parc03009
]
CI960_09375
03012 Translation factors [BR:
parc03012
]
CI960_09375
Enzymes [BR:
parc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CI960_09375
5.6.2.5 RNA 5'-3' helicase
CI960_09375
Ribosome biogenesis [BR:
parc03009
]
Eukaryotic type
Other ribosome biogenesis factors
CI960_09375
Translation factors [BR:
parc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CI960_09375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
nSTAND3
SLFN-g3_helicase
AAA_16
ResIII
DEAD
AAA_22
AAA_25
Helicase_RecD
ATPase
PhoH
AAA_5
T2SSE
UvrD_C_2
AAA
Herpes_ori_bp
NPHP3_N
cobW
AAA_28
AAA_7
NTPase_1
AAA_24
HEM4
Motif
Other DBs
NCBI-ProteinID:
AST53552
UniProt:
A0A223HMC7
LinkDB
All DBs
Position
2154806..2156728
Genome browser
AA seq
640 aa
AA seq
DB search
MGISSPLVDLQHQYDLLQKEYEYEKETYRQQSERTGLRKRVAQGLCWYPVTPGRSYYNSL
NQLVIEIERTENREIEHNFEYGRPVCFFTADISGKFKYLDFSATISYVQEDRMVVVLPTP
SALMDIQGKSNDLGVQLYFDETSYKTMFSALSDVMRAKNNQLSHLRDVLLGQEKPGQREL
FPIRFPWLNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQS
NTAVDCISEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAIRDIQ
SNMRKKSREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHF
TTLFIDEAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHT
KPETVSLLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDTPIVWFDTSECDFT
ENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLEENIDFGLISPYKAQVQYIRKLIK
QDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGKIGFLNDLRRMNVAITRARMK
LMILGDASTLTRHAFYKELYNYISQRGKIITINTKQEHEL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttcatcgccgcttgtagatttgcaacatcaatatgatctcctgcagaaagaa
tatgaatatgagaaggaaacataccgacagcaatccgagcgtacgggtttgcgaaaacga
gtggcgcagggcctctgttggtatccggtcactccgggacgcagttattataactcctta
aaccaattggtgatcgagatcgaaagaacagaaaaccgggagatcgagcataattttgag
tacgggcgcccggtttgcttctttacggcagatatcagtggtaaatttaagtatctggat
ttctccgccacgatcagctacgtgcaagaggaccggatggtggtagttctccccactcct
tccgccttgatggatatacaaggaaaaagcaatgatctcggcgtgcaactctacttcgac
gagaccagctataaaacgatgttttccgctctctcggacgtgatgcgggcaaaaaacaac
caactctctcatctaagggacgtattgctgggacaggaaaaaccgggacagcgggaatta
ttcccgatccgcttcccttggttgaaccgttctcaggaagaagccgtaaataaggtattg
ggagcgaaacaagtatctatcgtacacggccctcccggaactgggaaaacaaccaccttg
gtggaagccatttacgagacccttcaccgggagaatcaagtgatcgtttgcgcccaaagt
aataccgccgtagactgcatctcggagaaactggtagatagaggcattaacgtcctgcgc
atcgggaaccccactcgtatcaatgacaagatgctctctttcacatatgaacgccgtttc
gaatcgcatccggattatcccgaattatggagcatccggaaagcgatacgggatatacaa
tccaatatgcgaaagaaaagccgggaggaacgggatacgatccgaaaccgcctctcccgt
ttgaaattccgggcgaccgaactggaagtcaagatcgatacagagctgttcgacgaggct
cgtgtcgttgcttgcaccttggttggctccgcaaaccgggtcatgatgaaccggcacttc
acgaccttgtttatcgatgaggccgcccaagccttggaagctgcttgctggatagcgatc
ggcaaggcggaccgggtcatactagcgggcgatcatcaccaattgccccctactattaaa
tgtatagaagcggaacgagaaggcttaggacgtaccttgatgcaaaagatagcccacacg
aaaccggaaacagtctctctcctgaagatccaatatcgtatgcacgaggatatcatgcgc
ttctcctcccaatggttctatcataacgaactcgaatccgctcccgaggtaagtgggcga
ggaatcttgcgactggacactcccatcgtatggttcgatacgtccgagtgcgatttcacg
gaaaatacgagagaggagaccatgagccgtgtcaacaggcaagaggcggaattgctcgtg
gaacaattacgctcctatatacagaaaatatccaaggagagagtgctggaggagaatatc
gacttcggattgatctccccttataaggcgcaggtacaatacatccgtaaattaatcaaa
caggacgctttcttcaagcctttacgcagactgattaccgtacataccgtagacggtttc
caagggcaagaacgcgatgtcatcttgatcagtttggtaagggccaacgaggatggaaag
ataggcttcttgaacgacttgcggcgcatgaacgtagcgatcacccgtgcccgtatgaaa
ctgatgatcttgggagacgcttccacccttacccggcacgcattttataaagaactctat
aattatatctcccaaagaggtaaaataatcacgatcaacacgaaacaagagcatgaacta
taa
DBGET
integrated database retrieval system
