Parabacteroides sp. CT06: CI960_09500
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Entry
CI960_09500 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_09500
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_09500
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_2
Motif
Other DBs
NCBI-ProteinID:
AST53577
UniProt:
A0A223HMD6
LinkDB
All DBs
Position
complement(2190217..2191908)
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AA seq
563 aa
AA seq
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MKKIAIVALAAAATFITSCDIERMPYDKYTEDKIMEDKDAAVDVLLNGCYAKLKTASEHL
HYCGEFPGDNVCKDKPTTNPFGTYFTYQHTVNNGGLSTVWNSAYNIISQTSSLMKMINEN
ESPELNQKLGEAYYMRGMMYFYLCRVFGRPYYQEPEKNLGVPIVNGMPEDMDNLDLPDRS
SVKDTYEQVLSDLKKAEELMSDFKSPAYASKYAAQALLAKVYMYMSGTFENPNKEYAQLS
YNYANEVIESNQFSLLSRSTFMTYNELAPDAASQTETIFAVKFIASDWDDWGSPLGSMYA
EIDGQGWGEVYASAKYMDLLHETGKNTDAREAFIHPQYKKNDAGDQIPAFRFVANLYTDG
KISGYVYRQGETKEVGGKLIATVDDEEYTLTPVDVDNKRYSISYKGKTYVGDYDYLMLES
QGNPKFYSYKCSKQEGYPHLYSPVISRLGELYLIRAEASAKLGNYTKALADLNTVRTRSL
PNAGYKSLDATNAHELIMKERQLELAYEADRGFDVYRVGDTMKRHYPGFHDGVPEYPATS
PLAIQYIPQSEINAYPGTLTQNP
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatagctatagtggctcttgcggcagcggccacatttataacaagctgtgat
atcgaacgtatgccttatgataagtatacggaggacaagatcatggaagataaggatgct
gcggttgatgtcttattaaacggttgctacgctaaattgaaaactgcatctgagcattta
cactattgtggagagttccccggggataacgtttgcaaggataagccgaccacaaatcca
ttcggtacttactttacttatcagcataccgttaataatggtgggctttctacggtttgg
aacagtgcttataatatcatctcgcagacaagttctttaatgaagatgatcaatgagaat
gaatctccagagttgaaccaaaagttgggtgaggcctattatatgcgtggcatgatgtat
ttttatctgtgtcgtgtgtttggccgtccttattatcaagaaccggagaagaatctgggt
gtacctattgtgaatggtatgcctgaggatatggataacctggatcttccggatcgttct
tccgtgaaagatacgtatgagcaagttctgtctgacttgaaaaaggcagaagagttgatg
tctgattttaagtcgcccgcctatgcctcaaagtatgcggctcaagccttgttggccaag
gtttatatgtatatgagtggtacttttgagaatccgaataaggaatacgctcaattatct
tataattatgcgaatgaggtaatcgagagtaatcaattctccttattgagtcgttcgacg
tttatgacatataatgagcttgctccggatgcggcttctcaaacggagactatttttgcc
gtgaaattcattgcttcggattgggatgattggggtagcccgttaggtagtatgtatgcg
gagattgatggtcaaggctggggtgaggtatacgctagcgctaaatacatggatttgctg
catgagacaggtaaaaatacggatgcccgcgaggcttttatccatccacaatataagaag
aatgatgcgggagatcaaattccggctttccgtttcgtcgctaacttgtatacggacgga
aagatttccggttatgtatatcgtcagggtgagacaaaggaagtaggtggtaagttaatc
gctaccgtggatgatgaagagtacacattaactcccgtagatgtggataataaacgttat
tctattagttataagggaaaaacttatgtcggtgattatgattacctgatgttagaaagc
caaggtaatccgaaattctatagttataaatgctctaagcaagaaggttatccccacctt
tattcaccggttatctctcgcttaggtgagttatacctgattcgcgccgaggctagcgct
aaattaggaaactatacaaaagcattagccgatttgaataccgttcgtacccgttcctta
cctaacgccggatataaatctttggatgcgacaaacgctcatgagcttatcatgaaagaa
cgtcagttggaattagcttatgaggctgaccgtggttttgatgtatatcgtgtaggcgat
acgatgaaacgtcattacccgggattccatgacggcgtgcctgaatatcctgctaccagc
ccgttggctatccagtatattccgcagtctgagattaacgcttatccgggtacattaact
cagaatccgtaa
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