KEGG   Parabacteroides sp. CT06: CI960_10695
Entry
CI960_10695       CDS       T05011                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_10695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:parc03021]
    CI960_10695
Transcription machinery [BR:parc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI960_10695
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_ECF Sigma70_r4 Sigma70_r2 GerE DUF2774 TnsD HTH_23 PhyR_sigma2 NNF2_middle
Other DBs
NCBI-ProteinID: AST53781
LinkDB
Position
2448019..2448558
AA seq 179 aa
MDLFVLKKIKEGDIKAFESIFRLYYTPLCLYATSITGEQEVAEEIVQDLFYVFWKERESL
PILRSIKNYLYGATRNRSLQYLEHREVRYRYRNTVLAGENPESESYTPQDQLEYKELQSL
VNRALGKLPERRLRIFRMHRFEGMKYAEIASSLSLSIKTVEAEMTKALQTLRKEIENYT
NT seq 540 nt   +upstreamnt  +downstreamnt
atggatttgttcgtactcaaaaagatcaaggaaggggatattaaagcattcgaaagtatt
ttcaggctttattatacccctctttgcctgtacgcaaccagtataacaggagagcaggaa
gtcgcagaggagatagttcaggacttgttttatgtattctggaaagaaagagaatctctt
ccaatcttacgttccatcaagaactacctttatggagctacccggaaccggtccttacaa
tatctggagcatcgggaagtacgataccgataccggaatacggttttagccggagagaat
ccggaatccgaatcgtataccccgcaagatcaacttgagtacaaagaattgcaatccttg
gtcaaccgggcattaggtaaattgcccgaacgccgcctccggatctttcggatgcaccgt
ttcgaaggaatgaaatacgcggagatagcctccagcctctcattgtccataaagacagta
gaagcggaaatgaccaaggcactacaaacactaagaaaagaaatcgagaattatacctaa

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