Parabacteroides sp. CT06: CI960_10815
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Entry
CI960_10815 CDS
T05011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI960_10815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parc03021
]
CI960_10815
Transcription machinery [BR:
parc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI960_10815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
UPF0122
HTH_24
HTH_10
HTH_40
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AST56149
LinkDB
All DBs
Position
complement(2482411..2482959)
Genome browser
AA seq
182 aa
AA seq
DB search
MDKTIDDLFILKLIKAGDRLAFKHLFELYFTPLCRFVHLYMKKPGAAEDIVVDIFASFWE
RRETLQIQITLKAYLFQSARNRALNYLRDNERFISTDDFSSLERFENDETLETQELQRLI
HEAIFSLPPKCRDVFNKSRMDNLSNKEIAEQMNISVKAVEGHISRALKQIRAYLGDAYHY
LW
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggataaaactatagacgatttgtttattctaaaactgataaaagctggtgatagactg
gcttttaaacatctgtttgagttatatttcactcctttatgccgcttcgtacatttatat
atgaagaaaccgggagccgccgaggatatcgtagtcgatatctttgccagcttttgggaa
agacgggagaccttacaaatccagatcacgttgaaagcctatctattccagtccgcacgg
aatagggccttgaattacctaagagataacgagcgttttatctcaacggacgatttttcc
tctttggaacgtttcgagaatgacgagacattagaaactcaagagttgcaacgcctgatt
catgaggctattttctcccttcccccgaaatgccgtgatgtattcaataagagccgtatg
gacaacctttcaaataaggagatagcggagcaaatgaatataagcgttaaagccgtggaa
gggcatatttccagagcgttaaaacagatccgggcctatttgggggatgcctatcactac
ttatggtga
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