Parabacteroides sp. CT06: CI960_11330
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Entry
CI960_11330 CDS
T05011
Name
(GenBank) excinuclease ABC subunit UvrA
Organism
parc
Parabacteroides sp. CT06
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
RsgA_GTPase
AAA_23
nSTAND1
Viral_helicase1
DnaJ_CXXCXGXG
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AST53893
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Position
complement(2592689..2594932)
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AA seq
747 aa
AA seq
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MSNQEYIKIEGAYENNLKHISLDIPKKQITIFTGVSGSGKSSLVLDTIAASSRRELNETF
PSFVQQYLPKYGRPHVDRIGNLPVAIVIDQRKPAPNARSTVGTYTDIYSLLRLLFSRVGK
PFVGYSDTFSFNHPQGRCTRCDGLGEIRELDVHKLVDFDKCLNDEDVIHYVTFQPGQWRW
IRYACSGLFDLDKKIRDYTPEELRLFLYSPQIRLKNPPADWPKTAKYEGLVTRMYRSIIN
SEEGKIHQKVLEPMVTMGICPDCGGTRLNDKVLSCRINGRNIAEVTHMAIPEIIAWLREI
DDPLAKDMKQAIGGRLSALLEIGLGYLTLDRSMETLSGGEAQRCKIAKYINSSLSDMLYV
LDEPSVGLHSHDIHLLKASVRKLRDHGNTVLLVEHHKEMIQIADHIVDMGPGSGMEGGRI
LYEGDYAGLLRSDTLTGRMLGENTPLKESLRIPSGWFTVKHARLHNLKDVTVDLPMGVLA
VIAGVAGSGKSSLMECFRRDFPEEVIYISQKNIGISLRSTPATYLGVADDIRKLFAKESK
AGLSMFTFNGKGGCPVCGGKGVIVSDMAFMDSIETVCEACGGLRYSPEALRYTVDGLTIA
EVMDLTVRKASLRFAGTVIAEKLRPLMLVGLGYLHLNQALSTLSGGELQRVKLASYLGTQ
SKVFVLDEPTDGLHVKDIRHIISLFDSMVDQGNSVFLIEHNLDVLKAADYVIEIGPGGGL
MGGEILFSGTPKELLSCERSVTKDYLV
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcaagaatatatcaagatcgagggagcttatgagaataacttgaaacatatc
tctctggatattccgaagaagcaaatcactatattcaccggggtctcgggttccgggaaa
tcgtcgttggtattggataccattgccgccagttcacgtcgggagttgaatgagacgttc
cccagtttcgtgcagcaatacctgcccaaatatggccgtccgcatgtagaccggatcggg
aatctgccggtcgctatcgtgatagaccagcggaagcccgctcccaacgcccgttctacg
gtggggacttatacggatatctattcattgctccgtctcttgttctcacgggtgggcaaa
ccctttgtcggatattcggatacattctcctttaatcatccgcaaggccgttgtacccgt
tgtgacggattgggggagattcgtgagctggacgtgcataagctggttgattttgataaa
tgcctgaacgatgaggacgtgatccattacgtcaccttccagcccggccaatggcgatgg
atacgttatgcttgcagcggccttttcgatctggataagaagatccgggattatacgccg
gaggagttgcgcttattcctttattccccgcaaatccgtttgaagaatcctcctgccgac
tggccgaagacggcgaaatatgagggcttggtaacccgtatgtatcgcagcatcatcaat
tccgaggaagggaagatccatcaaaaggtcttggaaccgatggttacgatgggaatctgc
ccggattgcggtgggacccgcttgaacgataaggtactttcttgccggatcaacgggaga
aatatagccgaagtaactcatatggcgatccccgagataatcgcttggcttcgggagatt
gatgacccgttggcgaaagacatgaagcaggcgatcggaggccggttatccgccttattg
gagatcggtttggggtatttgacgctggatcgctccatggaaaccctttccggcggggag
gcgcaacgctgtaagatcgctaaatatatcaactcatctctttccgatatgctttatgtg
ttggatgagccgagcgtgggcttgcatagccacgatatccatttattgaaagcctcggtc
cgaaagttgcgggatcatgggaatacggtcttgctggtggaacatcataaggaaatgata
cagatcgccgatcatatcgtggatatggggccgggttcgggtatggagggcggccgtatc
ttgtacgagggagattatgcgggcttactccgtagcgataccttgaccggccgtatgcta
ggagaaaatacccctctgaaggaaagcctccggatcccgtccggttggtttacggtaaag
catgcccgtcttcataacttgaaggacgtgacggtagatcttcctatgggagtactggcg
gtgatcgccggtgtagccggttcagggaaaagctcgttgatggaatgcttccgccgggat
ttccccgaggaggtgatttatatcagccaaaagaatatcgggatcagcttgcgttccact
ccggccacttatctgggagttgcggatgatattcgtaaacttttcgctaaggaaagtaag
gctgggcttagtatgttcacgtttaacggaaaaggcggttgcccggtttgtgggggaaaa
ggcgtgatcgtgtctgatatggcttttatggattcgatcgagaccgtttgtgaggcttgt
ggaggattgcgttattccccggaagccttgcggtatacagtggatggtcttacgatcgcc
gaggtgatggacttgacagtccgcaaggcttcccttcgttttgcgggaacggtgatagcg
gagaaactccgtccgcttatgctggttggtctggggtatttgcatttgaaccaagcctta
tccacattatcgggaggtgagttgcaacgggtgaaactggcgtcttatctaggaacccaa
agcaaggtctttgtcttggatgagccgacggatggcttgcacgtgaaagatatcaggcat
attatctccttattcgattctatggtagatcaaggcaatagtgtcttcttgatcgaacat
aatctggatgtcttgaaagcggcggactatgtgatcgagataggtcctggaggcggacta
atggggggtgagatcttgtttagtggtactcccaaggagttactatcctgcgagcgttcc
gttacgaaagactatcttgtttga
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