Parabacteroides sp. CT06: CI960_14645
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Entry
CI960_14645 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_14645
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_14645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AST54497
LinkDB
All DBs
Position
3347767..3349413
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AA seq
548 aa
AA seq
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MKSIVNIGKLLVSIACVGALTTSCNSDFLDRPPLGTLDEVTYLSTKDAGYKLLVNCYQPL
QDSWNYQDMKFVLGDQLSDDCSKGGSDAGDRVRITEIARGTPMATNQVLSDLWTHRYQTA
ISACNVFLSLITPESELIDDAGGLVSTETKQRWIAEAQFMRAFYYYDLATIFQNIPLIDK
PMEVVDKSTITKSSKEEVMNFILKDLNTAIAEPNLPNAKSLPTSEIGRITKEAAMAFRAR
VLMFYGNYGEALKDLKAVVESGSYELVDDYEKLFNNATEGYMSKESVFITLRSYIPSYTS
GSVCPQMNVGRGIAGGWGGECPTKDLVDEYEVGDPRLVHTVLSSGDIFVKNDGSEEVHDY
SGYDNFPQQHSRKQYPDFSRRPLNDLLNTDWTHYHIRYADVLLMYAECLIETDGDKQLAA
DLINQVRYRAFVTTSLTDSYAKYRKFNLKESDRVTEDTFNAKYKVKASDDLRAAVRHERR
IELAGEGLRFYDLIRWGTFVSTMQKFGKTDEGKYSGAGTLVTDKTYPYPIPQSEIDYVGG
ALTQNDNY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctatagttaacatagggaaattacttgtatcgatcgcatgcgtcggtgccctt
acgacaagctgtaacagcgactttctagaccgcccgccattgggaacattggatgaggta
acttatctgagtaccaaggatgccggctacaaacttttggtcaattgctatcagccctta
caagatagctggaactatcaggacatgaaatttgtcttgggagatcaattgagcgacgac
tgctccaaaggcggctctgatgcaggagaccgcgttcgtatcacggaaatcgcccgcgga
acaccaatggcgactaatcaagtcttgtccgacctttggactcatcgctaccaaacagcg
atctcagcctgcaacgtattcctgtcgctaatcacacctgaatcagaattgatcgatgat
gccggaggcttggtcagcacagaaaccaaacagcgatggatcgcagaggctcaattcatg
cgtgcgttctattactacgacctagctacaatcttccagaatattccactaattgacaag
cccatggaagtcgtcgacaaaagtacgatcacgaaatccagcaaagaggaggtcatgaac
tttatcctgaaagacctgaacaccgcaatcgccgaacctaatctacctaatgcaaaaagc
cttccgaccagcgagattgggcgaatcaccaaagaggccgccatggctttccgtgctagg
gtattgatgttctacggcaactacggagaggctctgaaagacctgaaggcagttgtcgaa
tccggaagctatgaattagtagatgactacgagaagctattcaataacgccacagagggc
tatatgtcaaaagagtccgtcttcatcaccctgcgctcttacattcctagctacactagc
ggtagcgtttgtccacaaatgaatgtcggtcgcggtattgccggcggatggggcggcgag
tgtccgacgaaggatttggtagacgaatatgaggtaggcgatccacgcttggtacacacg
gtattgtcatccggcgatatattcgtcaagaacgatggttccgaagaggtacacgactat
tccggctacgacaatttcccacagcaacacagccgtaagcagtatccagacttctccaga
cggccactaaacgatttattgaacacggattggacccactatcacatccgctatgccgat
gtattgctgatgtacgctgaatgcctgatcgagacggatggcgacaaacaactagcggcc
gacctgatcaaccaagtacgttatcgtgccttcgtgacaacctctttgacagatagctac
gctaaataccgtaagttcaacctcaaggagagcgatcgagtgaccgaggatactttcaac
gctaagtataaagtgaaagcttccgatgatctgcgtgccgccgttcgccacgaacgccgt
atcgaacttgcaggcgagggattacgcttctacgacttaattcgctggggcaccttcgta
tctacaatgcagaaattcggcaagactgatgagggcaagtattccggtgccgggacactc
gtcaccgataagacatacccctacccgattccacaaagcgagatcgactatgtaggaggc
gcattaacacagaacgataattattaa
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