Parabacteroides sp. CT06: CI960_14855
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Entry
CI960_14855 CDS
T05011
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
parc
Parabacteroides sp. CT06
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA
HTH_30
HTH_23
AAA_16
MCM
HTH_22
HTH_28
AAA_19
P22_Cro
nSTAND3
AAA_7
TM1506
HTH_IclR
ATPase
AAA_2
PDE8A_N
Kinesin
Motif
Other DBs
NCBI-ProteinID:
AST54537
UniProt:
A0A223HQ56
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All DBs
Position
complement(3391190..3392560)
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AA seq
456 aa
AA seq
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MILIIDDDAAVRSSLTFLLKRAGFRPEAVPGPKEALEVVRATAPELILMDMNFTLTTTGE
EGIQLLRQVKIFRPDVPVILMTAWGSISLAVQGMQAGAFDFITKPWNNLVLLKSIRTALE
LSEQKKEANAPLNRSDADHKFHFDKIVGQSAALMDVLGTVSRIAPTNASVLITGESGTGK
ELIAEAIHANSPRSKEAFVKVNLGGLSQSLFESEMFGHKKGAFTDAYMDRVGRFEMANKG
TIFLDEIGDLELSCQVKLLRVLQDQTFEVLGDSRPRKVDIRVVSATNRDLRSMVADRTFR
EDLFYRINLITVHLPALRERREDIPLLARYFADKQSEINGLPRVEFSSDAQTYLSRLPFP
GNIRELKNLVERTILVSGKTLLDTADFEVHCMNTSGAKSTIPPSLEGLTLDELEKQTILR
SLEAHGGNLSHVATALGISRAALYRRLEKYGIPIDK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatactgataatagatgatgatgcggctgttcgttcctcgcttacattcctgctaaaa
cgtgcgggtttccggccggaggcggttccggggccgaaggaggccttggaggtagtccgt
gccacggcgccggagctgatcttgatggatatgaacttcacgttgactaccacgggtgag
gaggggattcaattattgagacaggtgaagatctttcgtcccgatgtacccgtgatcttg
atgaccgcttggggatcgatctctttggccgtgcagggaatgcaagccggagccttcgat
tttatcacgaagccttggaataacttggtattattaaaatcgatccggaccgccttggaa
ctgagcgagcagaagaaggaggcaaacgctcccttgaaccgttcggatgccgatcataaa
tttcattttgataagatcgtggggcaaagtgccgctttgatggatgtcttggggacggtc
tcgcgtatcgctccgacaaacgcctctgtcttgattaccggcgagagcggtacgggtaaa
gagctgatagcggaagcgatccatgcgaatagcccccggtcgaaagaggctttcgtaaaa
gtaaacctaggcggactttcccaaagtctttttgagagcgagatgttcggacataagaag
ggggcttttacggacgcgtacatggatcgggtagggcgtttcgagatggcgaacaaaggt
acgatcttcttggatgagatcggcgatttggaactgtcttgccaagtaaagctgcttcgg
gtattgcaagaccagacctttgaggtcttgggggatagccgtccccggaaggtggatata
cgggtcgtaagcgctacaaaccgggatttacgatcgatggtggcggaccgtacgttccgt
gaggatcttttttaccggatcaatttgatcacggtgcatttacccgccttacgtgagcga
agggaggatatcccattgctggcccggtatttcgcggataagcaatcggagatcaatggg
ctaccgagggtggagttctcatcggatgcccagacctatttaagccgtctcccttttccc
ggtaatatccgtgagttgaagaacttggtggagcggacgatccttgtgtcgggtaagacg
cttttggataccgctgatttcgaggttcattgcatgaatacatccggtgctaaatcgacg
attccgccttctttggagggcttgaccttggatgagttggagaagcaaaccatcttacgc
tccttggaagcgcatggaggtaatttatcgcatgtcgctacggcgttgggaatcagtcgt
gccgccttgtaccggagattagagaaatacggaatcccgatcgataaataa
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