Parabacteroides sp. CT06: CI960_15080
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Entry
CI960_15080 CDS
T05011
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
parc03032
]
CI960_15080
03036 Chromosome and associated proteins [BR:
parc03036
]
CI960_15080
03400 DNA repair and recombination proteins [BR:
parc03400
]
CI960_15080
DNA replication proteins [BR:
parc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CI960_15080
Chromosome and associated proteins [BR:
parc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CI960_15080
DNA repair and recombination proteins [BR:
parc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CI960_15080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
RTT107_BRCT_6
PqqD
Motif
Other DBs
NCBI-ProteinID:
AST54578
UniProt:
A0A223HQA5
LinkDB
All DBs
Position
3439548..3439820
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTA
RNISKNTTIIIPEHNIPSFKPAKTFIGEVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgttagcgagatttcaaaaagcactggtatcgacaaacagaca
gtgctagcaagcgttgagtccttcatggatatcgtaaaaagttctttagcccaaggcgaa
aacgtttacttgagaggtttcggaagtttcgttattaagaagagagctcaaaagacagct
cgtaatatttcaaaaaatactacgatcatcatcccggaacacaacattccgtcattcaag
ccggctaagacttttattggtgaagttaagtaa
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