Parabacteroides sp. CT06: CI960_16700
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Entry
CI960_16700 CDS
T05011
Name
(GenBank) tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI960_16700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parc03019
]
CI960_16700
Enzymes [BR:
parc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CI960_16700
Messenger RNA biogenesis [BR:
parc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CI960_16700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AST54868
UniProt:
A0A223HR31
LinkDB
All DBs
Position
complement(3758646..3760076)
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AA seq
476 aa
AA seq
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MYINEEEIVNHISAKPFHLISEAAEELGVEVYVIGGYVRDIFLNRPSKDIDVVAVGSGIE
LAKRVAKKIGRGAYLSVFKNFGTAQVKAGDLELEFVGARKESYSHDSRKPVVEDGTLEDD
QNRRDFTINALALCLNKERYGELVDPFGGLEDMDELTIRTPLDPDVTFSDDPLRMMRAVR
FATQLGFFIDPDTFDAIIRNRERISIISKERIVDELNKIVLSPKPSIGFDLLDKCGLLPL
IFPELCALKGVETKEGIGHKDNFAHTLMVLDRLSKTSDNLWLRWSALFHDIAKPATKRFD
PRLGWTFHNHNFIGERMIPGIFRKMKLPMNEKMKYVQKMVSLHMRPIALSDDEVTDSAIR
RLLFDAGDDIDDLMKLCEADITSKNPEKVRRFLNNFRKVREKLADIEEKDRVRNFQPPVS
GEEIMETFGLAPSKPVGVLKEAIKNAILDGVIPNEYEAARQFLIQRAEKMGLKPIL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaacgaggaagagatagtaaatcatatatccgcgaagcctttccatttgata
tcggaggcggcggaagagctaggtgttgaggtatatgtaataggcggatatgtgcgggat
attttcttgaaccgcccatccaaggatatagacgtggtagcggttggcagcggtatcgag
ttggccaaacgagtggccaagaagatcgggcgtggcgcttatctttccgtcttcaagaat
ttcgggacggcgcaggtgaaagccggcgatctggagctggaattcgtgggggcaaggaaa
gaatcctacagccatgacagccgtaagccagtcgtagaagacggcaccttggaggatgac
cagaaccgccgcgatttcacgatcaacgccttagccctttgcctgaataaggagcgttac
ggagaattggtcgatcctttcggagggttggaggatatggacgagcttacgatccgtacg
cctttagacccggatgttactttcagcgatgatccgctccggatgatgcgtgcggttcgt
ttcgccactcaattaggtttctttatcgatcccgataccttcgacgccatcatccgtaac
cgggaacgtatctccattatctccaaggaacgtatcgtggacgagttgaacaagatcgtc
ctctcgccaaagccctctatcggtttcgacttgctggataaatgcggactgttgccattg
attttccccgagctttgcgccttgaagggcgtggagaccaaggaggggatcgggcataag
gataatttcgcccataccttgatggtgctggatcgtttgagcaagacttccgataacctg
tggctgcgttggagcgccctcttccacgatatcgccaagcctgccacgaagcgtttcgac
cctcgcttgggatggacgttccataatcataattttatcggcgagcggatgatccccggt
attttcaggaagatgaaactcccgatgaacgagaagatgaagtacgtgcagaagatggta
agcttgcacatgcgtccgatcgccttgtcggacgatgaggtgacggattcggcgatccgc
cgtctgctgtttgacgcgggagatgatatcgacgatttgatgaaactgtgcgaggccgat
atcacgagcaagaacccggagaaagttcgccgtttcttgaacaacttccgtaaggtgcgc
gagaagctggccgatatagaggaaaaagaccgtgtccgtaacttccagcccccggtatcc
ggcgaggagatcatggagacgtttggcttggctccctccaagcctgtcggcgtgctgaaa
gaggcgatcaagaacgccatcctcgacggcgtgatcccgaacgagtatgaggcggcccgt
caattccttatacaacgtgcggagaagatggggctgaagccgattctgtga
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