Parabacteroides sp. CT06: CI960_16810
Help
Entry
CI960_16810 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_16810
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_16810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
DUF4923
Motif
Other DBs
NCBI-ProteinID:
AST54889
UniProt:
A0A223HR37
LinkDB
All DBs
Position
3787123..3788952
Genome browser
AA seq
609 aa
AA seq
DB search
MKRIYLSMVSLCLLGLCSCFDMDKYPEGELSSVNSFTSTTEITKYLNQFYESTLKINDKD
VANSAIKEQSNSIGNPTGIAFGDLNSDNMQSNVIDTRLAGETTLSSAVELTEYKHIRSLN
FLINNLDNCEEIGPEMEQCIGEAYFFRACYYYRLFVNYGEVTWLTKVLDPIQEQMERPRN
SRLEVADSILADLDIAIEHLNTQTNSSTMRVHKDVARALKSEVALFEGTWEKYHRAKNTP
FYDKKVTDEKISSYLRQAADAAKDVIDEGVWSISKGDPNTAYRDLFITLDLSHNPEVLWW
KKYDAANNIGHSVTRYLNKGGGTCGASASLVDDYLTKEGKPFVGSERDKAKVMYGDELSP
DLRDPRLSQTICMPGQDLRPNGEFVFKLPPLNEESRNQNTTGYSILKYVEYNTTYIPTID
GEGKSQAPAIQFRYADILLNYAEALAELDGAANASKIKEALRPLRERVGMPEMDFDREFN
TDPDYPFNKLDKYIQAVRRERRIEKALEGSRLQDILRWAAADILIIGKTPTGALFKGSSL
ETAYGESLQEGENLFLTGTPSDSKRYIIPFNNKHYPNGWQFNPERDYLLPIQPRMLSLTG
NQWVQNPGW
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatatatctatcaatggtttccctatgtctattagggctatgtagctgtttc
gacatggataaatatccggaaggagaattgtcttctgtcaattctttcaccagtacaaca
gaaatcaccaagtatctgaatcagttttatgaatcaactcttaaaattaatgacaaagat
gtggcaaactctgccataaaggaacaatctaacagcattggaaatccaacgggtatcgcc
tttggagacttgaatagcgataatatgcagagtaatgtaatagacacacgtcttgcggga
gaaaccacattaagttccgctgtcgaattaacagagtataaacatatcagaagtctaaac
ttcttaatcaacaacctcgataattgcgaggagatcggtccggaaatggagcaatgcatc
ggagaagcttatttcttcagagcctgctattattataggttattcgttaattatggagaa
gtcacttggttaacgaaagtattagatccgattcaagaacagatggaacgtccccgaaac
agtaggcttgaggtcgctgatagtatattggcggatttagatatagcgatcgagcatcta
aacactcaaaccaatagctcgacaatgcgtgtacacaaagatgtagcaagagcgcttaag
agtgaggtcgctttatttgaaggtacttgggagaaataccatcgtgcgaaaaacacgcca
ttctatgataaaaaagtaactgatgagaaaatcagctcttatctacggcaagccgcagat
gccgctaaagatgtaatagacgaaggggtatggagcatctcaaaaggggatcccaatacc
gcttatcgagacttgttcatcactttggatctctcacataatccagaagttttatggtgg
aagaaatatgatgccgccaataacatcggccattccgtaacacgttatttaaataaagga
ggtggcacttgtggggcatccgcttctcttgttgatgattatttaacaaaagaaggaaaa
ccttttgtcggttccgaacgagacaaagcaaaggtaatgtacggggacgaattgagtccg
gacttacgagacccacgattatcccagaccatttgcatgccaggacaagatttacgtcca
aatggagaattcgtattcaaacttcctcctttgaatgaggaaagccggaatcaaaatacg
acaggttattctatcctaaaatacgtagaatataatacgacttatattcctactatagat
ggggaaggcaaaagccaagcgccagctatacaattccgttacgccgatattttattaaac
tacgctgaggctctggcagaattagatggcgcggctaacgctagcaaaataaaagaagcc
ttaaggccacttcgagagcgtgtgggcatgcccgagatggatttcgacagagagttcaat
accgatcccgattatccgtttaataaattggataaatatatacaagcagtacgaagagaa
cgacgcatagaaaaagctttagagggaagccggctccaagatatcttgcgctgggccgcc
gcagacatcctcattattggaaaaactccaacaggtgcattattcaaagggagctctttg
gaaaccgcttatggagaaagcctgcaagaaggtgaaaatcttttcttaacaggtacgccc
tccgactccaaacgctatatcataccgttcaataataagcattatcctaacggatggcaa
ttcaatccggaacgagattatttattacccatacaacctcgtatgctatcgcttacaggt
aaccaatgggtccaaaaccccggttggtaa
DBGET
integrated database retrieval system
