Parabacteroides sp. CT06: CI960_17345
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Entry
CI960_17345 CDS
T05011
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
parc
Parabacteroides sp. CT06
Pathway
parc00190
Oxidative phosphorylation
parc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CI960_17345
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI960_17345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
parc03019
]
CI960_17345
Enzymes [BR:
parc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CI960_17345
Messenger RNA biogenesis [BR:
parc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CI960_17345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RNase_H2-Ydr279
Phage_connect_2
Motif
Other DBs
NCBI-ProteinID:
AST54990
LinkDB
All DBs
Position
complement(3897580..3899658)
Genome browser
AA seq
692 aa
AA seq
DB search
MENSYQYFKRDLSWLSFNYRVLLEAEDDTLPIYERIKFLSIYSSNLEEFYEIRVAEHRGV
IMKKNYSEESAAEAEETLAAITREVNRQQRDYYRIFSEKILPELNRQNVYLYQNEKPEPF
HEEFVHNFFNEEVFPFLSPVMIQAGDIRTFIRDRRLYLVIRMIKRSKRMNEPGFVPEYHY
ALMKIPYAKVPRFIELPPHDGKYYIMFIDDIIRANLQNVFPGYIIDGCYSIKISRDADIY
LDDESRANIVENIRKKVKKRKIGALSRFMYDQAMPDDFLAFVCDAFGITSEDLVLGGRYN
NLQDLMKLPNPAGKHLEQQPPVPMRVPFLDEMGSVFKAVKKRDILLHFPYESFDYLIRFL
MEAAFDPKVDEIKITQYRVAENSAVINTLVSAAQNGKKVTVFVELKARFDEENNMSTAER
MEQAGIRIIYSIPGLKVHAKVAVILRKDTSEGLKRRDFAYLSTGNFNEKTAKIYSDMALL
TSNTEIITDINKVFAVLEGRMKEPTFRHLLVARFNMVSELTGRIRREIEHVREGRKGRII
LKMNGLHDQHMIEELYHASEAGVEIDLIVRGICCLVPNQPYSANIRVTRIVDMFLEHSRV
WYFLNDGQEDLFLTSADWMRRNLNRRIETAFPILDPDLKREIIDILNIQLSDNVKACYLD
GELRNNFKCDDNPVKVRSQLAIYDYLRNKSIR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcatatcaatattttaaacgggacttaagctggttgtcgtttaactaccgt
gtcttgctggaagcggaagatgatacgctgcctatttatgagcgtattaagttcctttct
atctattcctcgaatctggaagaattttatgagatccgggttgcggaacatcggggggta
atcatgaaaaagaattattcggaggagagcgcagctgaggcggaagagaccttggcggct
atcacccgggaggttaaccgccagcaacgggactattaccgtattttctcggaaaagata
ttgccggaattgaatcgccagaatgtttacttataccagaatgagaagccggaacctttc
catgaagagtttgtccataatttctttaatgaggaggttttcccattcctgtcgccggtc
atgattcaagccggtgatatacgtacgttcatccgggatcgtcggctttaccttgtgatc
cgtatgattaagcggagcaagcggatgaatgagccgggcttcgtacccgagtatcattat
gcgttgatgaagattccttatgcgaaagttccccgttttatcgagttgcctccgcatgac
gggaaatattatatcatgtttatcgacgacattatccgtgcgaatttacagaatgttttt
cccggttatattattgatggctgttacagcatcaagatttcccgggatgcggatatttat
ttggatgatgagagccgggcgaatatcgtggagaatatccgtaagaaggtgaagaagcgc
aagatcggagccttgagccgttttatgtatgatcaagcgatgccggatgattttctggct
tttgtttgcgatgcctttggtattacgtcggaggacttggtgttaggtggacgatataat
aatttgcaggacttgatgaaattgccgaatccggcaggaaagcatttggagcagcagcca
ccggtgcctatgcgtgtgcctttcctcgatgagatggggtcggtattcaaggccgtgaag
aagcgggatatcttattgcatttcccttatgagtcattcgattatttgatccgctttttg
atggaggcggcctttgatccgaaggtggatgagatcaagattacccagtatcgagtggca
gagaattcggccgtgattaatacgctggtcagcgctgcccagaatggtaagaaagtgacg
gtattcgtggaattgaaagcccgtttcgacgaggagaataatatgagtacggcagagcgt
atggagcaggccggtattcgtatcatttatagtattccgggcttgaaagtacatgcgaag
gtcgcggtcattcttcggaaggatacgtccgagggacttaaacggcgtgattttgcctat
ttgagtaccggtaatttcaatgagaagacggccaagatctattcggatatggcgttattg
acttcgaatacggagattattacggatatcaataaagtattcgctgttttggaagggcgt
atgaaagaacctactttccgccatttgttggtggcccgtttcaatatggtctcggaattg
acaggtaggattcggcgggagatcgagcatgtgcgggaaggccgaaaaggacggatcata
ttaaagatgaacggactgcatgaccaacatatgatcgaggaactctatcatgcgagtgag
gcgggggtagagatcgatctgattgttcgggggatttgttgcctggtaccgaaccaacct
tatagcgctaacatccgggttactcgtatcgtggatatgtttttggagcattcacgggtt
tggtattttctgaatgatggtcaggaggatcttttccttacctcggctgattggatgcgt
cggaatttgaaccgacggatcgagacggctttcccgatcctcgatccggatctgaagagg
gagataatcgatatcttgaatatccagctaagtgacaacgtgaaagcttgttatttggat
ggcgagttacgtaataattttaagtgtgatgataatccggtaaaagtgcgttcgcaattg
gctatctatgattatttgagaaataaatccatacggtaa
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