Parabacteroides sp. CT06: CI960_17805
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Entry
CI960_17805 CDS
T05011
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_17805
Transporters [BR:
parc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CI960_17805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
AST55071
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All DBs
Position
complement(4013189..4014748)
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AA seq
519 aa
AA seq
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MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKE
VYNQGLFGFGITDGATPNAFNWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANY
LLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGVPIILTNISTEEARSLKRASL
EETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLACVEQIDAL
KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPT
DDLVAAYETIDGSPVDPENPYENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNR
LKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKAEAIIETNGNVADAIAILNRI
RTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH
EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttattagcatattgcttatcaattatactatgtgtctctttcacgggatgt
atggagaattatttggatttgtatcctgaggataagattacttcggcgagtttcccggaa
aatgaatcggatatcaaactccttttaaatggtgtctatgctcaattgagggaaaaagag
gtttataatcaaggcttgtttggctttggcataacggatggagctacccctaacgcattt
aactggggaacggatgaggtttttaataagttgggtgccgggcgattgagctctagtgac
ggaggagtcgtaacgtatcgttggaaaagatgttatgagataatctcccgggcaaactat
ttgttggcctgtatggatttagtggatttatcggaagaagcgaaagccaaatattcaggt
gagactcattttctacggggactggcttattccgtgctagcggaaacctatggtggggta
cctattatattgacgaacatttccacggaagaagctcgtagcttgaagcgggcgagtttg
gaggagacttggcaacaggcgttggatgattatgaggttgcgatcaccaatttgggagtg
gatgctcccgagccggggcgtgctaccaagggggcggctttaggtatgaaaatgcgagcc
tacttataccaaggtaaatacaaggaggttctggcttgtgtcgagcaaattgatgcgttg
aagaaatatggtctattccatagttatgagggcttgtttgatccggctaatgagaacaat
aaggaagtattgtttgatatccaatatattgaaggcgagaattcgcaaggttcctatatt
gaccagtattgcggaacgggtaccggaagttggacccgtggaagccgttatgtccctacg
gatgatttggtagcggcttatgagacgatcgacggctctcctgtagatcccgagaatcct
tatgagaaccgggatcctcgtttaggtttcacggctgtacttccgggttcttatttcttg
ggctatcgtttccctaattacctgtatccgggaggtgcgtttaatcatgccggtaatcgg
ttgaaacatttaagtacccgtaaatatcggattcaggatgagtcaaagcttcctccttcc
gggcagtcttatatcaatgatatcatactgagatatgcggatgtcttattgtcaaaagcg
gaggcgattattgagacgaatggaaatgtggcggatgcgatcgctatccttaaccggatc
cgtacggaaagggatgacgttaagatctctttgctgccgacatctatgagtcgtgaggag
gctcgtgagaaagtgagacatgagagacggattgagttagcattagaaggacgttattgg
tcagatgtaaaacgttggaaaatcggtaaggaactttaccctatgattattaaggatcat
gagggtagcgtgatcgagacgaagttcccaaatggctatttggaatattacgatttatta
ccgattcctgatagcgagcgctctttgaatccgaatttggatcagaacccgggttggtaa
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