Parabacteroides sp. CT06: CI960_17875
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Entry
CI960_17875 CDS
T05011
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc
Parabacteroides sp. CT06
Pathway
parc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI960_17875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
parc03021
]
CI960_17875
Transcription machinery [BR:
parc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI960_17875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF722
GerE
TnsD
HTH_36
bPH_8
DUF1804
Motif
Other DBs
NCBI-ProteinID:
AST55082
LinkDB
All DBs
Position
4036101..4036682
Genome browser
AA seq
193 aa
AA seq
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MERNPTKTDTDFLLRQITTEDNKLSFQRLFELYYPALCIYTKRFIPDRETREDIVQEVFS
SIWENRKRIVIRTSARNYLITATKNHCLNYLQRNHEEYVDKLPQEQIPIYADSGEELYTW
EELQTLLREALAKLPENYRYVFEKNRFENKSYGEIAEDMQISIRTVERYKNKAIEILKTE
LKDYLPLFIGWLF
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatccaacaaagactgataccgatttccttttacggcaaatcacgaccgag
gacaataagctctccttccaacgtttatttgagctatattatcctgctctttgcatatat
accaaacgttttatccctgatcgggaaacgagagaagatatcgtacaggaagttttttcc
tccatttgggaaaatcgtaaacgcatcgtaataagaacttccgcacgcaattatctcatc
acagctaccaaaaaccactgtctcaactatctgcaacgcaatcatgaagaatatgtagac
aaacttcctcaagagcaaatccctatctatgcggatagtggcgaggaactttatacttgg
gaagaattacaaaccctacttcgagaggcacttgctaaattacccgaaaactatcgatat
gtatttgagaagaatcgctttgagaataagagttacggcgagatcgcagaggatatgcaa
atatccatacggacagtagaaagatataaaaataaggcaattgaaatattaaagacagag
ttgaaagactacttacccctgttcattggttggctattttaa
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