KEGG   Parabacteroides sp. CT06: CI960_17875
Entry
CI960_17875       CDS       T05011                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
parc  Parabacteroides sp. CT06
Pathway
parc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:parc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI960_17875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:parc03021]
    CI960_17875
Transcription machinery [BR:parc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI960_17875
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF DUF722 GerE TnsD HTH_36 bPH_8 DUF1804
Other DBs
NCBI-ProteinID: AST55082
LinkDB
Position
4036101..4036682
AA seq 193 aa
MERNPTKTDTDFLLRQITTEDNKLSFQRLFELYYPALCIYTKRFIPDRETREDIVQEVFS
SIWENRKRIVIRTSARNYLITATKNHCLNYLQRNHEEYVDKLPQEQIPIYADSGEELYTW
EELQTLLREALAKLPENYRYVFEKNRFENKSYGEIAEDMQISIRTVERYKNKAIEILKTE
LKDYLPLFIGWLF
NT seq 582 nt   +upstreamnt  +downstreamnt
atggaaagaaatccaacaaagactgataccgatttccttttacggcaaatcacgaccgag
gacaataagctctccttccaacgtttatttgagctatattatcctgctctttgcatatat
accaaacgttttatccctgatcgggaaacgagagaagatatcgtacaggaagttttttcc
tccatttgggaaaatcgtaaacgcatcgtaataagaacttccgcacgcaattatctcatc
acagctaccaaaaaccactgtctcaactatctgcaacgcaatcatgaagaatatgtagac
aaacttcctcaagagcaaatccctatctatgcggatagtggcgaggaactttatacttgg
gaagaattacaaaccctacttcgagaggcacttgctaaattacccgaaaactatcgatat
gtatttgagaagaatcgctttgagaataagagttacggcgagatcgcagaggatatgcaa
atatccatacggacagtagaaagatataaaaataaggcaattgaaatattaaagacagag
ttgaaagactacttacccctgttcattggttggctattttaa

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