Parabacteroides sp. CT06: CI960_18245
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Entry
CI960_18245 CDS
T05011
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parc03016
]
CI960_18245 (truB)
Enzymes [BR:
parc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CI960_18245 (truB)
Transfer RNA biogenesis [BR:
parc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CI960_18245 (truB)
Prokaryotic type
CI960_18245 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AST55153
UniProt:
A0A223HRS7
LinkDB
All DBs
Position
complement(4102045..4102752)
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AA seq
235 aa
AA seq
DB search
MDFIAGEILYFNKPLTWTSFDLVNKFRYKLSRKLKVKKIKVGHAGTLDPLATGVMIVCTG
RATKRIDEFQYQTKEYIATLKLGETTPSFDLEKEIDAVYPTEHITRELVEEVLKTFVGTI
QQIPPVFSACKIEGKRAYELARKGEEVELKSKTLVIDELELLECDLPVIKIRVVCSKGTY
IRALARDIGKALNSGAHLIGLERTRIGEVTLDMCMSPEEIDDFLEKNVVKIEEEK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggattttatagctggagagattttatattttaataaaccgctaacgtggacttctttt
gacctagttaacaaatttcgctataagctaagtcggaaactgaaggtaaagaagattaaa
gttggacatgcggggacactggatcccttggctacaggtgtgatgatcgtttgtaccggg
agggctacgaagcggatcgatgagtttcaatatcagacgaaggaatatatcgctacgttg
aagttgggagagactaccccgtctttcgatttggagaaagagatagacgccgtgtatccc
acggaacatataacccgtgagctcgtggaggaggttttaaagacattcgtgggtacgatc
caacagattcccccggtgttctccgcttgcaaaatcgaaggtaaacgtgcttatgagcta
gccaggaaaggagaggaggttgaactaaaatccaagacattggttatagacgaactggag
ttgctggagtgtgatttgcctgttataaagatacgggtggtatgtagcaaaggtacctat
attcgtgcgttggctcgtgatatcgggaaggccttgaattccggcgctcatttgattggt
ttggaacggactcgcatcggagaggtaaccttggatatgtgtatgtctccagaggagatt
gatgatttcttagagaagaatgtggtaaaaatagaagaagaaaaataa
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