Parabacteroides sp. CT06: CI960_18305
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Entry
CI960_18305 CDS
T05011
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
parc
Parabacteroides sp. CT06
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
parc03016
]
CI960_18305
Enzymes [BR:
parc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CI960_18305
Transfer RNA biogenesis [BR:
parc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CI960_18305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AST55163
UniProt:
A0A223HRT0
LinkDB
All DBs
Position
complement(4120961..4122334)
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AA seq
457 aa
AA seq
DB search
MVNQENGVDLKSATQSDERKLFIETYGCQMNVADSEVVASIMKMDGYSMTENIEEADAIF
VNTCSVRDNAEQKIYGRLQYFQSLKRKKKSLIVGVLGCMAERVKEDLIHVHHADLVVGPD
SYLDLPNLVGAVEHGEKAINVELSTQETYKDVIPLKLPGVHISGFVSIMRGCNNFCTYCI
VPYTRGRERSRDIESILNEIRDMHEKGFKEVTLLGQNVNSYSFEKEGETITFPILLDRVA
KEVPDMRIRFTTSHPKDMSDDTLRVIAANDNICKFIHLPAQSGSSRILKVMNRKYTREWY
LDRIAAIRRIVPDCAISTDLFCGFHSETEEDYQETLSLMREVGYDSAFLFKYSERPGTYA
ASHLEDNVPEEEKVRRLQGMIDLQNKLSEESNLRDIGKTFEVLIEGFSKRSREQLFGRTS
QNKVVIFDKKNYHVGQFIKVKIHKASSATLFGEPVEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatcaagaaaacggtgtggacttaaaatccgctacccaaagcgatgaacgaaag
ttgtttatcgagacctacggctgtcagatgaatgtggcggacagcgaagttgtagcttct
atcatgaagatggatggctatagtatgacggagaatatcgaggaggcggatgccatcttc
gtgaatacttgctccgtacgcgacaacgccgaacagaaaatctatgggcggctacagtat
ttccagtctttaaaacggaaaaagaagtcattaattgtcggtgtattgggatgtatggcc
gaacgagtgaaggaagacctgatccatgtgcatcatgccgacttggtggtaggaccggat
tcttatctggacttgccgaacttggtgggagcggtagagcacggagagaaagcgatcaac
gtggagctttctacccaagagacctataaggatgttattcctttgaagttaccgggcgta
catatctccggtttcgtgtctattatgcgcggttgtaataatttctgtacgtattgcatc
gtaccttatacaagaggacgcgagcgtagccgggacatcgagagtatcttgaatgagata
cgggatatgcatgagaaaggctttaaggaagttacgttgttgggacaaaatgtaaactcc
tattctttcgagaaagaaggtgagaccataaccttcccgatcttgttggatcgtgtggcg
aaagaggttcccgatatgcgaattcgttttacgacctcccatccgaaggacatgagcgat
gataccttacgtgtgattgccgcaaacgacaatatctgtaagtttatccatctgcctgcc
caatccggcagcagtcgcatcttgaaggtcatgaatcgtaaatatactcgtgaatggtat
ctggaccgtatagcggcgatccgtcgtatcgtaccggattgcgctatctcgactgattta
ttctgcggtttccattccgagaccgaggaggattatcaagagactttatccttgatgcgt
gaagtgggatatgatagtgctttcttatttaaatattccgaacgtccgggtacatatgcc
gctagccatttggaggataatgtaccggaagaagagaaggtacgccgtttgcaaggtatg
atcgatttgcaaaataagttgtccgaggaaagtaacttgcgggatataggcaagactttc
gaggttctgatagaaggattctcgaaacgttcccgtgagcagttgttcggacgaaccagc
caaaacaaggtggtcatctttgataagaagaactatcatgtaggtcaattcataaaagtc
aagatccataaggcttcctcggctaccctgttcggggaacctgtggaggaataa
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